Nonlinear mixed-effects state space models with applications to HIV dynamics
Author
Abstract
Suggested Citation
DOI: 10.1016/j.spl.2013.01.032
Download full text from publisher
As the access to this document is restricted, you may want to search for a different version of it.
References listed on IDEAS
- Dacheng Liu & Tao Lu & Xu-Feng Niu & Hulin Wu, 2011. "Mixed-Effects State-Space Models for Analysis of Longitudinal Dynamic Systems," Biometrics, The International Biometric Society, vol. 67(2), pages 476-485, June.
- Yangxin Huang & Dacheng Liu & Hulin Wu, 2006. "Hierarchical Bayesian Methods for Estimation of Parameters in a Longitudinal HIV Dynamic System," Biometrics, The International Biometric Society, vol. 62(2), pages 413-423, June.
- Liang, Hua & Wu, Hulin, 2008. "Parameter Estimation for Differential Equation Models Using a Framework of Measurement Error in Regression Models," Journal of the American Statistical Association, American Statistical Association, vol. 103(484), pages 1570-1583.
- J. O. Ramsay & G. Hooker & D. Campbell & J. Cao, 2007. "Parameter estimation for differential equations: a generalized smoothing approach," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 69(5), pages 741-796, November.
Most related items
These are the items that most often cite the same works as this one and are cited by the same works as this one.- Hulin Wu & Hongqi Xue & Arun Kumar, 2012. "Numerical Discretization-Based Estimation Methods for Ordinary Differential Equation Models via Penalized Spline Smoothing with Applications in Biomedical Research," Biometrics, The International Biometric Society, vol. 68(2), pages 344-352, June.
- Liu, Baisen & Wang, Liangliang & Nie, Yunlong & Cao, Jiguo, 2019. "Bayesian inference of mixed-effects ordinary differential equations models using heavy-tailed distributions," Computational Statistics & Data Analysis, Elsevier, vol. 137(C), pages 233-246.
- Hanwen Huang, 2022. "Bayesian multi‐level mixed‐effects model for influenza dynamics," Journal of the Royal Statistical Society Series C, Royal Statistical Society, vol. 71(5), pages 1978-1995, November.
- Hanwen Huang & Andreas Handel & Xiao Song, 2020. "A Bayesian approach to estimate parameters of ordinary differential equation," Computational Statistics, Springer, vol. 35(3), pages 1481-1499, September.
- Qianwen Tan & Subhashis Ghosal, 2021. "Bayesian Analysis of Mixed-effect Regression Models Driven by Ordinary Differential Equations," Sankhya B: The Indian Journal of Statistics, Springer;Indian Statistical Institute, vol. 83(1), pages 3-29, May.
- Ahn, Kwang Woo & Chan, Kung-Sik, 2014. "Approximate conditional least squares estimation of a nonlinear state-space model via an unscented Kalman filter," Computational Statistics & Data Analysis, Elsevier, vol. 69(C), pages 243-254.
- Mu Niu & Benn Macdonald & Simon Rogers & Maurizio Filippone & Dirk Husmeier, 2018. "Statistical inference in mechanistic models: time warping for improved gradient matching," Computational Statistics, Springer, vol. 33(2), pages 1091-1123, June.
- Xinyu Zhang & Jiguo Cao & Raymond J. Carroll, 2017. "Estimating varying coefficients for partial differential equation models," Biometrics, The International Biometric Society, vol. 73(3), pages 949-959, September.
- Nanshan, Muye & Zhang, Nan & Xun, Xiaolei & Cao, Jiguo, 2022. "Dynamical modeling for non-Gaussian data with high-dimensional sparse ordinary differential equations," Computational Statistics & Data Analysis, Elsevier, vol. 173(C).
- Baisen Liu & Liangliang Wang & Yunlong Nie & Jiguo Cao, 2021. "Semiparametric Mixed-Effects Ordinary Differential Equation Models with Heavy-Tailed Distributions," Journal of Agricultural, Biological and Environmental Statistics, Springer;The International Biometric Society;American Statistical Association, vol. 26(3), pages 428-445, September.
- Strebel, Oliver, 2013. "A preprocessing method for parameter estimation in ordinary differential equations," Chaos, Solitons & Fractals, Elsevier, vol. 57(C), pages 93-104.
- Van Kinh Nguyen & Frank Klawonn & Rafael Mikolajczyk & Esteban A Hernandez-Vargas, 2016. "Analysis of Practical Identifiability of a Viral Infection Model," PLOS ONE, Public Library of Science, vol. 11(12), pages 1-16, December.
- Mu Niu & Joe Wandy & Rónán Daly & Simon Rogers & Dirk Husmeier, 2021. "R package for statistical inference in dynamical systems using kernel based gradient matching: KGode," Computational Statistics, Springer, vol. 36(1), pages 715-747, March.
- Shizhe Chen & Ali Shojaie & Daniela M. Witten, 2017. "Network Reconstruction From High-Dimensional Ordinary Differential Equations," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 112(520), pages 1697-1707, October.
- Lee, Kyoungjae & Lee, Jaeyong & Dass, Sarat C., 2018. "Inference for differential equation models using relaxation via dynamical systems," Computational Statistics & Data Analysis, Elsevier, vol. 127(C), pages 116-134.
- Ying Zhu, 2021. "Phase transitions in nonparametric regressions," Papers 2112.03626, arXiv.org, revised Nov 2023.
- Giles Hooker, 2010. "Comments on: Dynamic relations for sparsely sampled Gaussian processes," TEST: An Official Journal of the Spanish Society of Statistics and Operations Research, Springer;Sociedad de Estadística e Investigación Operativa, vol. 19(1), pages 50-53, May.
- Commenges, D. & Jolly, D. & Drylewicz, J. & Putter, H. & Thiébaut, R., 2011. "Inference in HIV dynamics models via hierarchical likelihood," Computational Statistics & Data Analysis, Elsevier, vol. 55(1), pages 446-456, January.
- Bin Zhu & Peter X.-K. Song & Jeremy M.G. Taylor, 2011. "Stochastic Functional Data Analysis: A Diffusion Model-Based Approach," Biometrics, The International Biometric Society, vol. 67(4), pages 1295-1304, December.
- Liu Baisen & Wang Liangliang & Cao Jiguo, 2018. "Bayesian estimation of ordinary differential equation models when the likelihood has multiple local modes," Monte Carlo Methods and Applications, De Gruyter, vol. 24(2), pages 117-127, June.
More about this item
Keywords
HIV dynamics; Nonlinear state space model; Mixed effect; Sequential Monte Carlo; EM algorithm;All these keywords.
Statistics
Access and download statisticsCorrections
All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:eee:stapro:v:83:y:2013:i:5:p:1448-1456. See general information about how to correct material in RePEc.
If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.
If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .
If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.
For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Catherine Liu (email available below). General contact details of provider: http://www.elsevier.com/wps/find/journaldescription.cws_home/622892/description#description .
Please note that corrections may take a couple of weeks to filter through the various RePEc services.