Evolutionary algorithms for species distribution modelling: A review in the context of machine learning
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DOI: 10.1016/j.ecolmodel.2018.11.013
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- A. Townsend Peterson & Miguel A. Ortega-Huerta & Jeremy Bartley & Victor Sánchez-Cordero & Jorge Soberón & Robert H. Buddemeier & David R. B. Stockwell, 2002. "Future projections for Mexican faunas under global climate change scenarios," Nature, Nature, vol. 416(6881), pages 626-629, April.
- Mouton, Ans M. & De Baets, Bernard & Van Broekhoven, Ester & Goethals, Peter L.M., 2009. "Prevalence-adjusted optimisation of fuzzy models for species distribution," Ecological Modelling, Elsevier, vol. 220(15), pages 1776-1786.
- Stockwell, David R.B. & Noble, Ian R., 1992. "Induction of sets of rules from animal distribution data: A robust and informative method of data analysis," Mathematics and Computers in Simulation (MATCOM), Elsevier, vol. 33(5), pages 385-390.
- Agoston E. Eiben & Jim Smith, 2015. "From evolutionary computation to the evolution of things," Nature, Nature, vol. 521(7553), pages 476-482, May.
- Jan M. Baert & Colin R. Janssen & Koen Sabbe & Frederik De Laender, 2016. "Per capita interactions and stress tolerance drive stress-induced changes in biodiversity effects on ecosystem functions," Nature Communications, Nature, vol. 7(1), pages 1-8, November.
- Muñoz-Mas, Rafael & Vezza, Paolo & Alcaraz-Hernández, Juan Diego & Martínez-Capel, Francisco, 2016. "Risk of invasion predicted with support vector machines: A case study on northern pike (Esox Lucius, L.) and bleak (Alburnus alburnus, L.)," Ecological Modelling, Elsevier, vol. 342(C), pages 123-134.
- Jeong, Kwang-Seuk & Jang, Ji-Deok & Kim, Dong-Kyun & Joo, Gea-Jae, 2011. "Waterfowls habitat modeling: Simulation of nest site selection for the migratory Little Tern (Sterna albifrons) in the Nakdong estuary," Ecological Modelling, Elsevier, vol. 222(17), pages 3149-3156.
- Fukuda, Shinji & De Baets, Bernard & Mouton, Ans M. & Waegeman, Willem & Nakajima, Jun & Mukai, Takahiko & Hiramatsu, Kazuaki & Onikura, Norio, 2011. "Effect of model formulation on the optimization of a genetic Takagi–Sugeno fuzzy system for fish habitat suitability evaluation," Ecological Modelling, Elsevier, vol. 222(8), pages 1401-1413.
- Chatfield, Chris, 1993. "Neural networks: Forecasting breakthrough or passing fad?," International Journal of Forecasting, Elsevier, vol. 9(1), pages 1-3, April.
- Grimm, Volker & Berger, Uta & DeAngelis, Donald L. & Polhill, J. Gary & Giske, Jarl & Railsback, Steven F., 2010. "The ODD protocol: A review and first update," Ecological Modelling, Elsevier, vol. 221(23), pages 2760-2768.
- Sadeghi, Roghayeh & Zarkami, Rahmat & Van Damme, Patrick, 2014. "Modelling habitat preference of an alien aquatic fern, Azolla filiculoides (Lam.), in Anzali wetland (Iran) using data-driven methods," Ecological Modelling, Elsevier, vol. 284(C), pages 1-9.
- Bennetsen, Elina & Gobeyn, Sacha & Goethals, Peter L.M., 2016. "Species distribution models grounded in ecological theory for decision support in river management," Ecological Modelling, Elsevier, vol. 325(C), pages 1-12.
- Fukuda, Shinji, 2009. "Consideration of fuzziness: Is it necessary in modelling fish habitat preference of Japanese medaka (Oryzias latipes)?," Ecological Modelling, Elsevier, vol. 220(21), pages 2877-2884.
- López-Ibáñez, Manuel & Dubois-Lacoste, Jérémie & Pérez Cáceres, Leslie & Birattari, Mauro & Stützle, Thomas, 2016. "The irace package: Iterated racing for automatic algorithm configuration," Operations Research Perspectives, Elsevier, vol. 3(C), pages 43-58.
- Mouton, Ans M. & De Baets, Bernard & Goethals, Peter L.M., 2010. "Ecological relevance of performance criteria for species distribution models," Ecological Modelling, Elsevier, vol. 221(16), pages 1995-2002.
- Zarkami, Rahmat & Sadeghi, Roghayeh & Goethals, Peter, 2012. "Use of fish distribution modelling for river management," Ecological Modelling, Elsevier, vol. 230(C), pages 44-49.
- Sadeghi, Roghayeh & Zarkami, Rahmat & Sabetraftar, Karim & Van Damme, Patrick, 2013. "Application of genetic algorithm and greedy stepwise to select input variables in classification tree models for the prediction of habitat requirements of Azolla filiculoides (Lam.) in Anzali wetland,," Ecological Modelling, Elsevier, vol. 251(C), pages 44-53.
- Fukuda, Shinji & Hiramatsu, Kazuaki, 2008. "Prediction ability and sensitivity of artificial intelligence-based habitat preference models for predicting spatial distribution of Japanese medaka (Oryzias latipes)," Ecological Modelling, Elsevier, vol. 215(4), pages 301-313.
- Austin, Mike, 2007. "Species distribution models and ecological theory: A critical assessment and some possible new approaches," Ecological Modelling, Elsevier, vol. 200(1), pages 1-19.
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Keywords
Evolutionary algorithms; Machine learning; Species distribution modelling; Model development; Automated model selection;All these keywords.
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