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A generalized multiple-try version of the Reversible Jump algorithm

Author

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  • Pandolfi, Silvia
  • Bartolucci, Francesco
  • Friel, Nial

Abstract

The Reversible Jump algorithm is one of the most widely used Markov chain Monte Carlo algorithms for Bayesian estimation and model selection. A generalized multiple-try version of this algorithm is proposed. The algorithm is based on drawing several proposals at each step and randomly choosing one of them on the basis of weights (selection probabilities) that may be arbitrarily chosen. Among the possible choices, a method is employed which is based on selection probabilities depending on a quadratic approximation of the posterior distribution. Moreover, the implementation of the proposed algorithm for challenging model selection problems, in which the quadratic approximation is not feasible, is considered. The resulting algorithm leads to a gain in efficiency with respect to the Reversible Jump algorithm, and also in terms of computational effort. The performance of this approach is illustrated for real examples involving a logistic regression model and a latent class model.

Suggested Citation

  • Pandolfi, Silvia & Bartolucci, Francesco & Friel, Nial, 2014. "A generalized multiple-try version of the Reversible Jump algorithm," Computational Statistics & Data Analysis, Elsevier, vol. 72(C), pages 298-314.
    • Handle: RePEc:eee:csdana:v:72:y:2014:i:c:p:298-314
    DOI: 10.1016/j.csda.2013.10.007
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    References listed on IDEAS

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    1. David I. Hastie & Peter J. Green, 2012. "Model choice using reversible jump Markov chain Monte Carlo," Statistica Neerlandica, Netherlands Society for Statistics and Operations Research, vol. 66(3), pages 309-338, August.
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    5. Liu, Rui-Yin & Tao, Jian & Shi, Ning-Zhong & He, Xuming, 2011. "Bayesian analysis of the patterns of biological susceptibility via reversible jump MCMC sampling," Computational Statistics & Data Analysis, Elsevier, vol. 55(3), pages 1498-1508, March.
    6. Nial Friel & Jason Wyse, 2012. "Estimating the evidence – a review," Statistica Neerlandica, Netherlands Society for Statistics and Operations Research, vol. 66(3), pages 288-308, August.
    7. Francesco Bartolucci & Luisa Scaccia & Antonietta Mira, 2006. "Efficient Bayes factor estimation from the reversible jump output," Biometrika, Biometrika Trust, vol. 93(1), pages 41-52, March.
    8. Martino, Luca & Del Olmo, Victor Pascual & Read, Jesse, 2012. "A multi-point Metropolis scheme with generic weight functions," Statistics & Probability Letters, Elsevier, vol. 82(7), pages 1445-1453.
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    Cited by:

    1. Mike K. P. So & Wing Ki Liu & Amanda M. Y. Chu, 2018. "Bayesian Shrinkage Estimation Of Time-Varying Covariance Matrices In Financial Time Series," Advances in Decision Sciences, Asia University, Taiwan, vol. 22(1), pages 369-404, December.
    2. Xin Luo & Håkon Tjelmeland, 2019. "A multiple-try Metropolis–Hastings algorithm with tailored proposals," Computational Statistics, Springer, vol. 34(3), pages 1109-1133, September.

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