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Semiparametric transformation joint models for longitudinal covariates and interval-censored failure time

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  • Chen, Chyong-Mei
  • Shen, Pao-sheng
  • Tseng, Yi-Kuan

Abstract

In many clinical trials and epidemiology research, subjects are followed-up repeatedly, and repeated measurements on longitudinal covariates as well as an observation on a possibly censored time-to-event are collected on each subject. The longitudinal covariates are often measured intermittently with measurement errors, and the measurement process is terminated by a correlated event process, leading to informative missing data. Methods for joint modelling of longitudinal and time to-event data have received much attention in the statistics literature in recent years. Most research has focused on right-censoring mechanism for the event time. In practice, the event time is often examined at the pre-scheduled times, at which the longitudinal covariates are also measured, resulting in interval-censored survival data. To take the interval censoring into account and to provide a more general framework for studying the effects of covariates on survival time, a new class of joint models is proposed. The joint model comprises a linear mixed-effects model for the longitudinal biomarkers and a class of semiparametric transformation models for the failure time, which incorporates the underlying longitudinal biomarkers as time-dependent covariates. The likelihood approach and an EM algorithm for obtaining the semiparametric maximum likelihood estimator (SPMLE) are developed. In M-step, a hybrid algorithm combining the Newton–Raphson and self-consistency algorithms is used to compute the finite-dimensional and infinite-dimensional parameters. The existence and consistency of the SPMLE are established. The proposed method is investigated through simulation studies and illustrated using a real dataset from a Taiwanese HIV/AIDS cohort study.

Suggested Citation

  • Chen, Chyong-Mei & Shen, Pao-sheng & Tseng, Yi-Kuan, 2018. "Semiparametric transformation joint models for longitudinal covariates and interval-censored failure time," Computational Statistics & Data Analysis, Elsevier, vol. 128(C), pages 116-127.
  • Handle: RePEc:eee:csdana:v:128:y:2018:i:c:p:116-127
    DOI: 10.1016/j.csda.2018.07.001
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    References listed on IDEAS

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    1. Y. K. Tseng & Y. R. Su & M. Mao & J. L. Wang, 2015. "An extended hazard model with longitudinal covariates," Biometrika, Biometrika Trust, vol. 102(1), pages 135-150.
    2. Yi-Kuan Tseng & Fushing Hsieh & Jane-Ling Wang, 2005. "Joint modelling of accelerated failure time and longitudinal data," Biometrika, Biometrika Trust, vol. 92(3), pages 587-603, September.
    3. Fushing Hsieh & Yi-Kuan Tseng & Jane-Ling Wang, 2006. "Joint Modeling of Survival and Longitudinal Data: Likelihood Approach Revisited," Biometrics, The International Biometric Society, vol. 62(4), pages 1037-1043, December.
    4. Donglin Zeng & Lu Mao & D. Y. Lin, 2016. "Maximum likelihood estimation for semiparametric transformation models with interval-censored data," Biometrika, Biometrika Trust, vol. 103(2), pages 253-271.
    5. Ralitza Gueorguieva & Robert Rosenheck & Haiqun Lin, 2012. "Joint modelling of longitudinal outcome and interval‐censored competing risk dropout in a schizophrenia clinical trial," Journal of the Royal Statistical Society Series A, Royal Statistical Society, vol. 175(2), pages 417-433, April.
    6. Wang Y. & Taylor J. M. G., 2001. "Jointly Modeling Longitudinal and Event Time Data With Application to Acquired Immunodeficiency Syndrome," Journal of the American Statistical Association, American Statistical Association, vol. 96, pages 895-905, September.
    7. Jimin Ding & Jane-Ling Wang, 2008. "Modeling Longitudinal Data with Nonparametric Multiplicative Random Effects Jointly with Survival Data," Biometrics, The International Biometric Society, vol. 64(2), pages 546-556, June.
    8. Anaïs Rouanet & Pierre Joly & Jean‐François Dartigues & Cécile Proust‐Lima & Hélène Jacqmin‐Gadda, 2016. "Joint latent class model for longitudinal data and interval‐censored semi‐competing events: Application to dementia," Biometrics, The International Biometric Society, vol. 72(4), pages 1123-1135, December.
    9. Elizabeth R. Brown & Joseph G. Ibrahim, 2003. "A Bayesian Semiparametric Joint Hierarchical Model for Longitudinal and Survival Data," Biometrics, The International Biometric Society, vol. 59(2), pages 221-228, June.
    10. Rizopoulos, Dimitris, 2010. "JM: An R Package for the Joint Modelling of Longitudinal and Time-to-Event Data," Journal of Statistical Software, Foundation for Open Access Statistics, vol. 35(i09).
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