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Introgression of submergence tolerance into CO 43, a popular rice variety of India, through marker-assisted backcross breeding

Author

Listed:
  • Hifzur RAHMAN

    (Centre for Plant Molecular Biology and Biotechnology, Tamil Nadu Agricultural University, Coimbatore, India)

  • Vijayalakshmi DAKSHINAMURTHI

    (Centre for Plant Molecular Biology and Biotechnology, Tamil Nadu Agricultural University, Coimbatore, India)

  • Sasikala RAMASAMY

    (Centre for Plant Molecular Biology and Biotechnology, Tamil Nadu Agricultural University, Coimbatore, India)

  • Sudha MANICKAM

    (Centre for Plant Molecular Biology and Biotechnology, Tamil Nadu Agricultural University, Coimbatore, India)

  • Ashok Kumar KALIYAPERUMAL

    (Centre for Plant Molecular Biology and Biotechnology, Tamil Nadu Agricultural University, Coimbatore, India)

  • Suchismita RAHA

    (Centre for Plant Molecular Biology and Biotechnology, Tamil Nadu Agricultural University, Coimbatore, India)

  • Naresh PANNEERSELVAM

    (Centre for Plant Molecular Biology and Biotechnology, Tamil Nadu Agricultural University, Coimbatore, India)

  • Valarmathi RAMANATHAN

    (Centre for Plant Molecular Biology and Biotechnology, Tamil Nadu Agricultural University, Coimbatore, India)

  • Jagadeeshselvam NALLATHAMBI

    (Centre for Plant Molecular Biology and Biotechnology, Tamil Nadu Agricultural University, Coimbatore, India)

  • Robin SABARIAPPAN

    (Centre for Plant Molecular Biology and Biotechnology, Tamil Nadu Agricultural University, Coimbatore, India)

  • Muthurajan RAVEENDRAN

Abstract

Submergence is a major threat in rice growing areas of South and South-East Asia. Identification of a major QTL, Sub1 and advancements in marker-assisted backcrossing strategy enabled breeders to develop submergence tolerant versions of popular rice cultivars. In the present study, a marker-assisted backcross breeding (MABB) approach was used to introgress the Sub1 locus from the tolerant FR13A variety into CO 43, one of the popular rice varieties of southern India. Evaluation of early generation segregating progenies derived from the cross of CO 43 and FR13A revealed the introgression of Sub1, leading to increased tolerance to submergence and better revival ability after it. Genotyping and phenotyping of BC3F3 generation resulted in elite NILs of CO 43 harbouring Sub1 the locus and possessing 94.37% and 95.78% of the recurrent parental CO 43 genome. Selected NILs performed equal as the recurrent parent CO 43 under normal conditions, but were more tolerant to submergence and revived better, afterwards. Under flooding NILs yielded about 25-30% higher than the recurrent parent CO 43.

Suggested Citation

  • Hifzur RAHMAN & Vijayalakshmi DAKSHINAMURTHI & Sasikala RAMASAMY & Sudha MANICKAM & Ashok Kumar KALIYAPERUMAL & Suchismita RAHA & Naresh PANNEERSELVAM & Valarmathi RAMANATHAN & Jagadeeshselvam NALLATH, 2018. "Introgression of submergence tolerance into CO 43, a popular rice variety of India, through marker-assisted backcross breeding," Czech Journal of Genetics and Plant Breeding, Czech Academy of Agricultural Sciences, vol. 54(3), pages 101-108.
    • Handle: RePEc:caa:jnlcjg:v:54:y:2018:i:3:id:149-2017-cjgpb
    DOI: 10.17221/149/2017-CJGPB
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    References listed on IDEAS

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    1. Hoanh, Chu Thai & Szuster, Brian W. & Kam, Suan Pheng & Ismail, Abdelbagi M. & Noble, Andrew D. (ed.), 2010. "Tropical deltas and coastal zones: food production, communities and environment at the land-water interface," IWMI Books, International Water Management Institute, number 137592.
    2. Kenong Xu & Xia Xu & Takeshi Fukao & Patrick Canlas & Reycel Maghirang-Rodriguez & Sigrid Heuer & Abdelbagi M. Ismail & Julia Bailey-Serres & Pamela C. Ronald & David J. Mackill, 2006. "Sub1A is an ethylene-response-factor-like gene that confers submergence tolerance to rice," Nature, Nature, vol. 442(7103), pages 705-708, August.
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