IDEAS home Printed from https://ideas.repec.org/a/bpj/ijbist/v5y2009i1n2.html
   My bibliography  Save this article

The Comparison of Alternative Smoothing Methods for Fitting Non-Linear Exposure-Response Relationships with Cox Models in a Simulation Study

Author

Listed:
  • Govindarajulu Usha S

    (Harvard Medical School)

  • Malloy Elizabeth J

    (American University)

  • Ganguli Bhaswati

    (University of Calcutta)

  • Spiegelman Donna

    (Harvard School of Public Health)

  • Eisen Ellen A

    (University of California, Berkeley)

Abstract

We examined the behavior of alternative smoothing methods for modeling environmental epidemiology data. Model fit can only be examined when the true exposure-response curve is known and so we used simulation studies to examine the performance of penalized splines (P-splines), restricted cubic splines (RCS), natural splines (NS), and fractional polynomials (FP). Survival data were generated under six plausible exposure-response scenarios with a right skewed exposure distribution, typical of environmental exposures. Cox models with each spline or FP were fit to simulated datasets. The best models, e.g. degrees of freedom, were selected using default criteria for each method. The root mean-square error (rMSE) and area difference were computed to assess model fit and bias (difference between the observed and true curves). The test for linearity was a measure of sensitivity and the test of the null was an assessment of statistical power. No one method performed best according to all four measures of performance, however, all methods performed reasonably well. The model fit was best for P-splines for almost all true positive scenarios, although fractional polynomials and RCS were least biased, on average.

Suggested Citation

  • Govindarajulu Usha S & Malloy Elizabeth J & Ganguli Bhaswati & Spiegelman Donna & Eisen Ellen A, 2009. "The Comparison of Alternative Smoothing Methods for Fitting Non-Linear Exposure-Response Relationships with Cox Models in a Simulation Study," The International Journal of Biostatistics, De Gruyter, vol. 5(1), pages 1-21, January.
  • Handle: RePEc:bpj:ijbist:v:5:y:2009:i:1:n:2
    DOI: 10.2202/1557-4679.1104
    as

    Download full text from publisher

    File URL: https://doi.org/10.2202/1557-4679.1104
    Download Restriction: For access to full text, subscription to the journal or payment for the individual article is required.

    File URL: https://libkey.io/10.2202/1557-4679.1104?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    As the access to this document is restricted, you may want to search for a different version of it.

    References listed on IDEAS

    as
    1. Patrick Royston & Douglas G. Altman, 1994. "Regression Using Fractional Polynomials of Continuous Covariates: Parsimonious Parametric Modelling," Journal of the Royal Statistical Society Series C, Royal Statistical Society, vol. 43(3), pages 429-453, September.
    2. David M. Zucker & Donna Spiegelman, 2004. "Inference for the Proportional Hazards Model with Misclassified Discrete-Valued Covariates," Biometrics, The International Biometric Society, vol. 60(2), pages 324-334, June.
    Full references (including those not matched with items on IDEAS)

    Citations

    Citations are extracted by the CitEc Project, subscribe to its RSS feed for this item.
    as


    Cited by:

    1. Alexandra L. Bellows & Donna Spiegelman & Shufa Du & Lindsay M. Jaacks, 2020. "The Association of Cooking Fuel Use, Dietary Intake, and Blood Pressure among Rural Women in China," IJERPH, MDPI, vol. 17(15), pages 1-14, July.
    2. Felipe Diaz-Toro & Gabriela Nazar & Claudia Troncoso & Yeny Concha-Cisternas & Ana Maria Leiva-Ordoñez & Maria Adela Martinez-Sanguinetti & Solange Parra-Soto & Nicole Lasserre-Laso & Igor Cigarroa & , 2023. "Frailty Index as a Predictor of Mortality in Middle-Aged and Older People: A Prospective Analysis of Chilean Adults," IJERPH, MDPI, vol. 20(2), pages 1-11, January.
    3. Kyoji Furukawa & Munechika Misumi & John B. Cologne & Harry M. Cullings, 2016. "A Bayesian Semiparametric Model for Radiation Dose‐Response Estimation," Risk Analysis, John Wiley & Sons, vol. 36(6), pages 1211-1223, June.

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Noémi Kreif & Richard Grieve & Iván Díaz & David Harrison, 2015. "Evaluation of the Effect of a Continuous Treatment: A Machine Learning Approach with an Application to Treatment for Traumatic Brain Injury," Health Economics, John Wiley & Sons, Ltd., vol. 24(9), pages 1213-1228, September.
    2. Proto, Eugenio & Rustichini, Aldo, 2012. "Life Satisfaction, Household Income and Personality Traits," CAGE Online Working Paper Series 86, Competitive Advantage in the Global Economy (CAGE).
    3. Christel Faes & Marc Aerts & Helena Geys & Geert Molenberghs, 2007. "Model Averaging Using Fractional Polynomials to Estimate a Safe Level of Exposure," Risk Analysis, John Wiley & Sons, vol. 27(1), pages 111-123, February.
    4. Adrian Adermon & Mikael Lindahl & Daniel Waldenström, 2018. "Intergenerational Wealth Mobility and the Role of Inheritance: Evidence from Multiple Generations," Economic Journal, Royal Economic Society, vol. 128(612), pages 482-513, July.
    5. Jackson, Christopher, 2016. "flexsurv: A Platform for Parametric Survival Modeling in R," Journal of Statistical Software, Foundation for Open Access Statistics, vol. 70(i08).
    6. Hünermund, Paul & Czarnitzki, Dirk, 2019. "Estimating the causal effect of R&D subsidies in a pan-European program," Research Policy, Elsevier, vol. 48(1), pages 115-124.
    7. Malloy, Elizabeth J. & Spiegelman, Donna & Eisen, Ellen A., 2009. "Comparing measures of model selection for penalized splines in Cox models," Computational Statistics & Data Analysis, Elsevier, vol. 53(7), pages 2605-2616, May.
    8. Proto, Eugenio & Rustichini, Aldo, 2015. "Life satisfaction, income and personality," Journal of Economic Psychology, Elsevier, vol. 48(C), pages 17-32.
    9. Marcelo Cajias & Philipp Freudenreich & Anna Heller & Wolfgang Schaefers, 2018. "Censored Quantile Regressions and the Determinants of Real Estate Liquidity," ERES eres2018_203, European Real Estate Society (ERES).
    10. Marisa Rifada & Vita Ratnasari & Purhadi Purhadi, 2023. "Parameter Estimation and Hypothesis Testing of The Bivariate Polynomial Ordinal Logistic Regression Model," Mathematics, MDPI, vol. 11(3), pages 1-12, January.
    11. Pregaldini, Damiano & Backes-Gellner, Uschi & Eisenkopf, Gerald, 2020. "Girls’ preferences for STEM and the effects of classroom gender composition: New evidence from a natural experiment," Journal of Economic Behavior & Organization, Elsevier, vol. 178(C), pages 102-123.
    12. Jiří Valecký, 2017. "Calculation of Solvency Capital Requirements for Non-life Underwriting Risk Using Generalized Linear Models," Prague Economic Papers, Prague University of Economics and Business, vol. 2017(4), pages 450-466.
    13. Paul Hünermund & Dirk Czarnitzki, 2016. "Estimating the local average treatment effect of R&D subsidies in a pan-European program," Working Papers of Department of Management, Strategy and Innovation, Leuven 541177, KU Leuven, Faculty of Economics and Business (FEB), Department of Management, Strategy and Innovation, Leuven.
    14. Carslake, David & Fraser, Abigail & Davey Smith, George & May, Margaret & Palmer, Tom & Sterne, Jonathan & Silventoinen, Karri & Tynelius, Per & Lawlor, Debbie A. & Rasmussen, Finn, 2013. "Associations of mortality with own height using son's height as an instrumental variable," Economics & Human Biology, Elsevier, vol. 11(3), pages 351-359.
    15. Noori Akhtar-Danesh, 2015. "A Comparison of Modeling Scales in Flexible Parametric Models," 2015 Stata Conference 15, Stata Users Group.
    16. Prokop, Viktor & Gerstlberger, Wolfgang & Zapletal, David & Gyamfi, Solomon, 2023. "Do we need human capital heterogeneity for energy efficiency and innovativeness? Insights from European catching-up territories," Energy Policy, Elsevier, vol. 177(C).
    17. Daniela Balutel & Christopher S. Henry & Kim P. Huynh & Marcel C. Voia, 2024. "Cash in the Pocket, Cash in the Cloud: Cash Holdings of Bitcoin Owners," International Journal of Central Banking, International Journal of Central Banking, vol. 20(3), pages 115-159, July.
    18. Sauerbrei, W. & Meier-Hirmer, C. & Benner, A. & Royston, P., 2006. "Multivariable regression model building by using fractional polynomials: Description of SAS, STATA and R programs," Computational Statistics & Data Analysis, Elsevier, vol. 50(12), pages 3464-3485, August.
    19. Sauerbrei, Willi & Royston, Patrick & Zapien, Karina, 2007. "Detecting an interaction between treatment and a continuous covariate: A comparison of two approaches," Computational Statistics & Data Analysis, Elsevier, vol. 51(8), pages 4054-4063, May.
    20. William D. Dupont, 2010. "Review of Multivariable Model-building: A Pragmatic Approach to Regression Analysis Based on Fractional Polynomials for Modeling Continuous Variables, by Royston and Sauerbrei," Stata Journal, StataCorp LP, vol. 10(2), pages 297-302, June.

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:bpj:ijbist:v:5:y:2009:i:1:n:2. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Peter Golla (email available below). General contact details of provider: https://www.degruyter.com .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.