IDEAS home Printed from https://ideas.repec.org/a/taf/jnlasa/v112y2017i517p201-214.html
   My bibliography  Save this article

A Multi-Resolution Approximation for Massive Spatial Datasets

Author

Listed:
  • Matthias Katzfuss

Abstract

Automated sensing instruments on satellites and aircraft have enabled the collection of massive amounts of high-resolution observations of spatial fields over large spatial regions. If these datasets can be efficiently exploited, they can provide new insights on a wide variety of issues. However, traditional spatial-statistical techniques such as kriging are not computationally feasible for big datasets. We propose a multi-resolution approximation (M-RA) of Gaussian processes observed at irregular locations in space. The M-RA process is specified as a linear combination of basis functions at multiple levels of spatial resolution, which can capture spatial structure from very fine to very large scales. The basis functions are automatically chosen to approximate a given covariance function, which can be nonstationary. All computations involving the M-RA, including parameter inference and prediction, are highly scalable for massive datasets. Crucially, the inference algorithms can also be parallelized to take full advantage of large distributed-memory computing environments. In comparisons using simulated data and a large satellite dataset, the M-RA outperforms a related state-of-the-art method. Supplementary materials for this article are available online.

Suggested Citation

  • Matthias Katzfuss, 2017. "A Multi-Resolution Approximation for Massive Spatial Datasets," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 112(517), pages 201-214, January.
  • Handle: RePEc:taf:jnlasa:v:112:y:2017:i:517:p:201-214
    DOI: 10.1080/01621459.2015.1123632
    as

    Download full text from publisher

    File URL: http://hdl.handle.net/10.1080/01621459.2015.1123632
    Download Restriction: Access to full text is restricted to subscribers.

    File URL: https://libkey.io/10.1080/01621459.2015.1123632?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    As the access to this document is restricted, you may want to search for a different version of it.

    References listed on IDEAS

    as
    1. Matthias Katzfuss & Jonathan R. Stroud & Christopher K. Wikle, 2016. "Understanding the Ensemble Kalman Filter," The American Statistician, Taylor & Francis Journals, vol. 70(4), pages 350-357, October.
    2. Wenceslao González‐Manteiga & Rosa M. Crujeiras & Matthias Katzfuss & Noel Cressie, 2012. "Bayesian hierarchical spatio‐temporal smoothing for very large datasets," Environmetrics, John Wiley & Sons, Ltd., vol. 23(1), pages 94-107, February.
    3. Kaufman, Cari G. & Schervish, Mark J. & Nychka, Douglas W., 2008. "Covariance Tapering for Likelihood-Based Estimation in Large Spatial Data Sets," Journal of the American Statistical Association, American Statistical Association, vol. 103(484), pages 1545-1555.
    4. Sudipto Banerjee & Alan E. Gelfand & Andrew O. Finley & Huiyan Sang, 2008. "Gaussian predictive process models for large spatial data sets," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 70(4), pages 825-848, September.
    5. Fuentes, Montserrat, 2007. "Approximate Likelihood for Large Irregularly Spaced Spatial Data," Journal of the American Statistical Association, American Statistical Association, vol. 102, pages 321-331, March.
    6. Michael L. Stein & Zhiyi Chi & Leah J. Welty, 2004. "Approximating likelihoods for large spatial data sets," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 66(2), pages 275-296, May.
    7. Kanti Mardia & Colin Goodall & Edwin Redfern & Francisco Alonso, 1998. "The Kriged Kalman filter," TEST: An Official Journal of the Spanish Society of Statistics and Operations Research, Springer;Sociedad de Estadística e Investigación Operativa, vol. 7(2), pages 217-282, December.
    8. Caragea, Petruta C. & Smith, Richard L., 2007. "Asymptotic properties of computationally efficient alternative estimators for a class of multivariate normal models," Journal of Multivariate Analysis, Elsevier, vol. 98(7), pages 1417-1440, August.
    9. Finn Lindgren & Håvard Rue & Johan Lindström, 2011. "An explicit link between Gaussian fields and Gaussian Markov random fields: the stochastic partial differential equation approach," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 73(4), pages 423-498, September.
    10. Noel Cressie & Gardar Johannesson, 2008. "Fixed rank kriging for very large spatial data sets," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 70(1), pages 209-226, February.
    11. Gramacy, Robert B & Lee, Herbert K. H, 2008. "Bayesian Treed Gaussian Process Models With an Application to Computer Modeling," Journal of the American Statistical Association, American Statistical Association, vol. 103(483), pages 1119-1130.
    12. Moreno Bevilacqua & Carlo Gaetan & Jorge Mateu & Emilio Porcu, 2012. "Estimating Space and Space-Time Covariance Functions for Large Data Sets: A Weighted Composite Likelihood Approach," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 107(497), pages 268-280, March.
    13. Matthias Katzfuss & Noel Cressie, 2011. "Spatio‐temporal smoothing and EM estimation for massive remote‐sensing data sets," Journal of Time Series Analysis, Wiley Blackwell, vol. 32, pages 430-446, July.
    14. Matthias Katzfuss, 2013. "Bayesian nonstationary spatial modeling for very large datasets," Environmetrics, John Wiley & Sons, Ltd., vol. 24(3), pages 189-200, May.
    15. Schlather, Martin & Malinowski, Alexander & Menck, Peter J. & Oesting, Marco & Strokorb, Kirstin, 2015. "Analysis, Simulation and Prediction of Multivariate Random Fields with Package RandomFields," Journal of Statistical Software, Foundation for Open Access Statistics, vol. 63(i08).
    16. Lemos, Ricardo T. & Sansó, Bruno, 2009. "A Spatio-Temporal Model for Mean, Anomaly, and Trend Fields of North Atlantic Sea Surface Temperature," Journal of the American Statistical Association, American Statistical Association, vol. 104(485), pages 5-18.
    Full references (including those not matched with items on IDEAS)

    Citations

    Citations are extracted by the CitEc Project, subscribe to its RSS feed for this item.
    as


    Cited by:

    1. Bevilacqua, Moreno & Caamaño-Carrillo, Christian & Porcu, Emilio, 2022. "Unifying compactly supported and Matérn covariance functions in spatial statistics," Journal of Multivariate Analysis, Elsevier, vol. 189(C).
    2. Matthias Katzfuss & Joseph Guinness & Wenlong Gong & Daniel Zilber, 2020. "Vecchia Approximations of Gaussian-Process Predictions," Journal of Agricultural, Biological and Environmental Statistics, Springer;The International Biometric Society;American Statistical Association, vol. 25(3), pages 383-414, September.
    3. Matthew J. Heaton & Abhirup Datta & Andrew O. Finley & Reinhard Furrer & Joseph Guinness & Rajarshi Guhaniyogi & Florian Gerber & Robert B. Gramacy & Dorit Hammerling & Matthias Katzfuss & Finn Lindgr, 2019. "A Case Study Competition Among Methods for Analyzing Large Spatial Data," Journal of Agricultural, Biological and Environmental Statistics, Springer;The International Biometric Society;American Statistical Association, vol. 24(3), pages 398-425, September.
    4. Edwards, Matthew & Castruccio, Stefano & Hammerling, Dorit, 2020. "Marginally parameterized spatio-temporal models and stepwise maximum likelihood estimation," Computational Statistics & Data Analysis, Elsevier, vol. 151(C).
    5. Huang Huang & Sameh Abdulah & Ying Sun & Hatem Ltaief & David E. Keyes & Marc G. Genton, 2021. "Competition on Spatial Statistics for Large Datasets," Journal of Agricultural, Biological and Environmental Statistics, Springer;The International Biometric Society;American Statistical Association, vol. 26(4), pages 580-595, December.
    6. Horváth, Lajos & Kokoszka, Piotr & Wang, Shixuan, 2020. "Testing normality of data on a multivariate grid," Journal of Multivariate Analysis, Elsevier, vol. 179(C).
    7. Jingjie Zhang & Matthias Katzfuss, 2022. "Multi-Scale Vecchia Approximations of Gaussian Processes," Journal of Agricultural, Biological and Environmental Statistics, Springer;The International Biometric Society;American Statistical Association, vol. 27(3), pages 440-460, September.
    8. Mauricio Campos & Bo Li & Guillaume Lafontaine & Joseph Napier & Feng Sheng Hu, 2024. "Integrating Different Data Sources Using a Bayesian Hierarchical Model to Unveil Glacial Refugia," Journal of Agricultural, Biological and Environmental Statistics, Springer;The International Biometric Society;American Statistical Association, vol. 29(3), pages 576-600, September.
    9. Chen, Yewen & Chang, Xiaohui & Luo, Fangzhi & Huang, Hui, 2023. "Additive dynamic models for correcting numerical model outputs," Computational Statistics & Data Analysis, Elsevier, vol. 187(C).
    10. Zilber, Daniel & Katzfuss, Matthias, 2021. "Vecchia–Laplace approximations of generalized Gaussian processes for big non-Gaussian spatial data," Computational Statistics & Data Analysis, Elsevier, vol. 153(C).
    11. Bledar A. Konomi & Emily L. Kang & Ayat Almomani & Jonathan Hobbs, 2023. "Bayesian Latent Variable Co-kriging Model in Remote Sensing for Quality Flagged Observations," Journal of Agricultural, Biological and Environmental Statistics, Springer;The International Biometric Society;American Statistical Association, vol. 28(3), pages 423-441, September.
    12. Caamaño-Carrillo, Christian & Bevilacqua, Moreno & López, Cristian & Morales-Oñate, Víctor, 2024. "Nearest neighbors weighted composite likelihood based on pairs for (non-)Gaussian massive spatial data with an application to Tukey-hh random fields estimation," Computational Statistics & Data Analysis, Elsevier, vol. 191(C).
    13. Zammit-Mangion, Andrew & Rougier, Jonathan, 2018. "A sparse linear algebra algorithm for fast computation of prediction variances with Gaussian Markov random fields," Computational Statistics & Data Analysis, Elsevier, vol. 123(C), pages 116-130.
    14. Kirsner, Daniel & Sansó, Bruno, 2020. "Multi-scale shotgun stochastic search for large spatial datasets," Computational Statistics & Data Analysis, Elsevier, vol. 146(C).
    15. Fangpo Wang & Anirban Bhattacharya & Alan E. Gelfand, 2018. "Rejoinder on: Process modeling for slope and aspect with application to elevation data maps," TEST: An Official Journal of the Spanish Society of Statistics and Operations Research, Springer;Sociedad de Estadística e Investigación Operativa, vol. 27(4), pages 783-786, December.

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Isabelle Grenier & Bruno Sansó & Jessica L. Matthews, 2024. "Multivariate nearest‐neighbors Gaussian processes with random covariance matrices," Environmetrics, John Wiley & Sons, Ltd., vol. 35(3), May.
    2. Matthew J. Heaton & Abhirup Datta & Andrew O. Finley & Reinhard Furrer & Joseph Guinness & Rajarshi Guhaniyogi & Florian Gerber & Robert B. Gramacy & Dorit Hammerling & Matthias Katzfuss & Finn Lindgr, 2019. "A Case Study Competition Among Methods for Analyzing Large Spatial Data," Journal of Agricultural, Biological and Environmental Statistics, Springer;The International Biometric Society;American Statistical Association, vol. 24(3), pages 398-425, September.
    3. Sameh Abdulah & Yuxiao Li & Jian Cao & Hatem Ltaief & David E. Keyes & Marc G. Genton & Ying Sun, 2023. "Large‐scale environmental data science with ExaGeoStatR," Environmetrics, John Wiley & Sons, Ltd., vol. 34(1), February.
    4. Matthias Katzfuss & Joseph Guinness & Wenlong Gong & Daniel Zilber, 2020. "Vecchia Approximations of Gaussian-Process Predictions," Journal of Agricultural, Biological and Environmental Statistics, Springer;The International Biometric Society;American Statistical Association, vol. 25(3), pages 383-414, September.
    5. Caamaño-Carrillo, Christian & Bevilacqua, Moreno & López, Cristian & Morales-Oñate, Víctor, 2024. "Nearest neighbors weighted composite likelihood based on pairs for (non-)Gaussian massive spatial data with an application to Tukey-hh random fields estimation," Computational Statistics & Data Analysis, Elsevier, vol. 191(C).
    6. Furrer, Reinhard & Bachoc, François & Du, Juan, 2016. "Asymptotic properties of multivariate tapering for estimation and prediction," Journal of Multivariate Analysis, Elsevier, vol. 149(C), pages 177-191.
    7. Morales-Oñate, Víctor & Crudu, Federico & Bevilacqua, Moreno, 2021. "Blockwise Euclidean likelihood for spatio-temporal covariance models," Econometrics and Statistics, Elsevier, vol. 20(C), pages 176-201.
    8. Giovanna Jona Lasinio & Gianluca Mastrantonio & Alessio Pollice, 2013. "Discussing the “big n problem”," Statistical Methods & Applications, Springer;Società Italiana di Statistica, vol. 22(1), pages 97-112, March.
    9. Zilber, Daniel & Katzfuss, Matthias, 2021. "Vecchia–Laplace approximations of generalized Gaussian processes for big non-Gaussian spatial data," Computational Statistics & Data Analysis, Elsevier, vol. 153(C).
    10. Karl Pazdernik & Ranjan Maitra & Douglas Nychka & Stephan Sain, 2018. "Reduced Basis Kriging for Big Spatial Fields," Sankhya A: The Indian Journal of Statistics, Springer;Indian Statistical Institute, vol. 80(2), pages 280-300, August.
    11. Si Cheng & Bledar A. Konomi & Georgios Karagiannis & Emily L. Kang, 2024. "Recursive nearest neighbor co‐kriging models for big multi‐fidelity spatial data sets," Environmetrics, John Wiley & Sons, Ltd., vol. 35(4), June.
    12. Jingjie Zhang & Matthias Katzfuss, 2022. "Multi-Scale Vecchia Approximations of Gaussian Processes," Journal of Agricultural, Biological and Environmental Statistics, Springer;The International Biometric Society;American Statistical Association, vol. 27(3), pages 440-460, September.
    13. Jialuo Liu & Tingjin Chu & Jun Zhu & Haonan Wang, 2022. "Large spatial data modeling and analysis: A Krylov subspace approach," Scandinavian Journal of Statistics, Danish Society for Theoretical Statistics;Finnish Statistical Society;Norwegian Statistical Association;Swedish Statistical Association, vol. 49(3), pages 1115-1143, September.
    14. Zahra Barzegar & Firoozeh Rivaz, 2020. "A scalable Bayesian nonparametric model for large spatio-temporal data," Computational Statistics, Springer, vol. 35(1), pages 153-173, March.
    15. Paciorek, Christopher J. & Lipshitz, Benjamin & Zhuo, Wei & Prabhat, . & Kaufman, Cari G. G. & Thomas, Rollin C., 2015. "Parallelizing Gaussian Process Calculations in R," Journal of Statistical Software, Foundation for Open Access Statistics, vol. 63(i10).
    16. Litvinenko, Alexander & Sun, Ying & Genton, Marc G. & Keyes, David E., 2019. "Likelihood approximation with hierarchical matrices for large spatial datasets," Computational Statistics & Data Analysis, Elsevier, vol. 137(C), pages 115-132.
    17. Padoan, Simone A. & Bevilacqua, Moreno, 2015. "Analysis of Random Fields Using CompRandFld," Journal of Statistical Software, Foundation for Open Access Statistics, vol. 63(i09).
    18. Edwards, Matthew & Castruccio, Stefano & Hammerling, Dorit, 2020. "Marginally parameterized spatio-temporal models and stepwise maximum likelihood estimation," Computational Statistics & Data Analysis, Elsevier, vol. 151(C).
    19. Waley W. J. Liang & Herbert K. H. Lee, 2019. "Bayesian nonstationary Gaussian process models via treed process convolutions," Advances in Data Analysis and Classification, Springer;German Classification Society - Gesellschaft für Klassifikation (GfKl);Japanese Classification Society (JCS);Classification and Data Analysis Group of the Italian Statistical Society (CLADAG);International Federation of Classification Societies (IFCS), vol. 13(3), pages 797-818, September.
    20. Ryan J. Parker & Brian J. Reich & Jo Eidsvik, 2016. "A Fused Lasso Approach to Nonstationary Spatial Covariance Estimation," Journal of Agricultural, Biological and Environmental Statistics, Springer;The International Biometric Society;American Statistical Association, vol. 21(3), pages 569-587, September.

    More about this item

    Statistics

    Access and download statistics

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:taf:jnlasa:v:112:y:2017:i:517:p:201-214. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Chris Longhurst (email available below). General contact details of provider: http://www.tandfonline.com/UASA20 .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.