IDEAS home Printed from https://ideas.repec.org/a/spr/sankha/v81y2019i1d10.1007_s13171-018-0139-5.html
   My bibliography  Save this article

An Infinitesimal Probabilistic Model for Principal Component Analysis of Manifold Valued Data

Author

Listed:
  • Stefan Sommer

    (University of Copenhagen)

Abstract

We provide a probabilistic and infinitesimal view of how the principal component analysis procedure (PCA) can be generalized to analysis of nonlinear manifold valued data. Starting with the probabilistic PCA interpretation of the Euclidean PCA procedure, we show how PCA can be generalized to manifolds in an intrinsic way that does not resort to linearization of the data space. The underlying probability model is constructed by mapping a Euclidean stochastic process to the manifold using stochastic development of Euclidean semimartingales. The construction uses a connection and bundles of covariant tensors to allow global transport of principal eigenvectors, and the model is thereby an example of how principal fiber bundles can be used to handle the lack of global coordinate system and orientations that characterizes manifold valued statistics. We show how curvature implies non-integrability of the equivalent of Euclidean principal subspaces, and how the stochastic flows provide an alternative to explicit construction of such subspaces. We describe estimation procedures for inference of parameters and prediction of principal components, and we give examples of properties of the model on embedded surfaces.

Suggested Citation

  • Stefan Sommer, 2019. "An Infinitesimal Probabilistic Model for Principal Component Analysis of Manifold Valued Data," Sankhya A: The Indian Journal of Statistics, Springer;Indian Statistical Institute, vol. 81(1), pages 37-62, February.
  • Handle: RePEc:spr:sankha:v:81:y:2019:i:1:d:10.1007_s13171-018-0139-5
    DOI: 10.1007/s13171-018-0139-5
    as

    Download full text from publisher

    File URL: http://link.springer.com/10.1007/s13171-018-0139-5
    File Function: Abstract
    Download Restriction: Access to the full text of the articles in this series is restricted.

    File URL: https://libkey.io/10.1007/s13171-018-0139-5?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    As the access to this document is restricted, you may want to search for a different version of it.

    References listed on IDEAS

    as
    1. Delyon, Bernard & Hu, Ying, 2006. "Simulation of conditioned diffusion and application to parameter estimation," Stochastic Processes and their Applications, Elsevier, vol. 116(11), pages 1660-1675, November.
    2. Michael E. Tipping & Christopher M. Bishop, 1999. "Probabilistic Principal Component Analysis," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 61(3), pages 611-622.
    3. Sungkyu Jung & Ian L. Dryden & J. S. Marron, 2012. "Analysis of principal nested spheres," Biometrika, Biometrika Trust, vol. 99(3), pages 551-568.
    Full references (including those not matched with items on IDEAS)

    Citations

    Citations are extracted by the CitEc Project, subscribe to its RSS feed for this item.
    as


    Cited by:

    1. Arthur Pewsey & Eduardo García-Portugués, 2021. "Recent advances in directional statistics," TEST: An Official Journal of the Spanish Society of Statistics and Operations Research, Springer;Sociedad de Estadística e Investigación Operativa, vol. 30(1), pages 1-58, March.

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Arthur Pewsey & Eduardo García-Portugués, 2021. "Recent advances in directional statistics," TEST: An Official Journal of the Spanish Society of Statistics and Operations Research, Springer;Sociedad de Estadística e Investigación Operativa, vol. 30(1), pages 1-58, March.
    2. Wang, Zihan & Daeipour, Mohamad & Xu, Hongyi, 2023. "Quantification and propagation of Aleatoric uncertainties in topological structures," Reliability Engineering and System Safety, Elsevier, vol. 233(C).
    3. Matteo Barigozzi & Matteo Luciani, 2019. "Quasi Maximum Likelihood Estimation and Inference of Large Approximate Dynamic Factor Models via the EM algorithm," Papers 1910.03821, arXiv.org, revised Sep 2024.
    4. Xin Xu & Yang Lu & Yupeng Zhou & Zhiguo Fu & Yanjie Fu & Minghao Yin, 2021. "An Information-Explainable Random Walk Based Unsupervised Network Representation Learning Framework on Node Classification Tasks," Mathematics, MDPI, vol. 9(15), pages 1-14, July.
    5. Dorota Toczydlowska & Gareth W. Peters & Man Chung Fung & Pavel V. Shevchenko, 2017. "Stochastic Period and Cohort Effect State-Space Mortality Models Incorporating Demographic Factors via Probabilistic Robust Principal Components," Risks, MDPI, vol. 5(3), pages 1-77, July.
    6. Matteo Barigozzi & Marc Hallin, 2023. "Dynamic Factor Models: a Genealogy," Papers 2310.17278, arXiv.org, revised Jan 2024.
    7. Chen, Tao & Martin, Elaine & Montague, Gary, 2009. "Robust probabilistic PCA with missing data and contribution analysis for outlier detection," Computational Statistics & Data Analysis, Elsevier, vol. 53(10), pages 3706-3716, August.
    8. Chen, Andrew Y. & McCoy, Jack, 2024. "Missing values handling for machine learning portfolios," Journal of Financial Economics, Elsevier, vol. 155(C).
    9. Wang, Shao-Hsuan & Huang, Su-Yun, 2022. "Perturbation theory for cross data matrix-based PCA," Journal of Multivariate Analysis, Elsevier, vol. 190(C).
    10. Cook, R. Dennis, 2022. "A slice of multivariate dimension reduction," Journal of Multivariate Analysis, Elsevier, vol. 188(C).
    11. Wentao Qu & Xianchao Xiu & Huangyue Chen & Lingchen Kong, 2023. "A Survey on High-Dimensional Subspace Clustering," Mathematics, MDPI, vol. 11(2), pages 1-39, January.
    12. Mardia, Kanti V. & Wiechers, Henrik & Eltzner, Benjamin & Huckemann, Stephan F., 2022. "Principal component analysis and clustering on manifolds," Journal of Multivariate Analysis, Elsevier, vol. 188(C).
    13. Ligon, Ethan, 2017. "Estimating household welfare from disaggregate expenditures," Department of Agricultural & Resource Economics, UC Berkeley, Working Paper Series qt5gc4h1fm, Department of Agricultural & Resource Economics, UC Berkeley.
    14. Jiaju Miao & Pawel Polak, 2023. "Online Ensemble of Models for Optimal Predictive Performance with Applications to Sector Rotation Strategy," Papers 2304.09947, arXiv.org.
    15. Marconi, Gabriele, 2014. "European higher education policies and the problem of estimating a complex model with a small cross-section," MPRA Paper 87600, University Library of Munich, Germany.
    16. Lazar, Drew & Lin, Lizhen, 2017. "Scale and curvature effects in principal geodesic analysis," Journal of Multivariate Analysis, Elsevier, vol. 153(C), pages 64-82.
    17. Jingying Yang, 2024. "Element Aggregation for Estimation of High-Dimensional Covariance Matrices," Mathematics, MDPI, vol. 12(7), pages 1-16, March.
    18. Jingtao Wang & Gregory J. Fonseca & Jun Ding, 2024. "scSemiProfiler: Advancing large-scale single-cell studies through semi-profiling with deep generative models and active learning," Nature Communications, Nature, vol. 15(1), pages 1-27, December.
    19. Dorota Toczydlowska & Gareth W. Peters, 2018. "Financial Big Data Solutions for State Space Panel Regression in Interest Rate Dynamics," Econometrics, MDPI, vol. 6(3), pages 1-45, July.
    20. Golightly Andrew & Wilkinson Darren J., 2015. "Bayesian inference for Markov jump processes with informative observations," Statistical Applications in Genetics and Molecular Biology, De Gruyter, vol. 14(2), pages 169-188, April.

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:spr:sankha:v:81:y:2019:i:1:d:10.1007_s13171-018-0139-5. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Sonal Shukla or Springer Nature Abstracting and Indexing (email available below). General contact details of provider: http://www.springer.com .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.