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Forecasting future Humphrey Visual Fields using deep learning

Author

Listed:
  • Joanne C Wen
  • Cecilia S Lee
  • Pearse A Keane
  • Sa Xiao
  • Ariel S Rokem
  • Philip P Chen
  • Yue Wu
  • Aaron Y Lee

Abstract

Purpose: To determine if deep learning networks could be trained to forecast future 24–2 Humphrey Visual Fields (HVFs). Methods: All data points from consecutive 24–2 HVFs from 1998 to 2018 were extracted from a university database. Ten-fold cross validation with a held out test set was used to develop the three main phases of model development: model architecture selection, dataset combination selection, and time-interval model training with transfer learning, to train a deep learning artificial neural network capable of generating a point-wise visual field prediction. The point-wise mean absolute error (PMAE) and difference in Mean Deviation (MD) between predicted and actual future HVF were calculated. Results: More than 1.7 million perimetry points were extracted to the hundredth decibel from 32,443 24–2 HVFs. The best performing model with 20 million trainable parameters, CascadeNet-5, was selected. The overall point-wise PMAE for the test set was 2.47 dB (95% CI: 2.45 dB to 2.48 dB), and deep learning showed a statistically significant improvement over linear models. The 100 fully trained models successfully predicted future HVFs in glaucomatous eyes up to 5.5 years in the future with a correlation of 0.92 between the MD of predicted and actual future HVF and an average difference of 0.41 dB. Conclusions: Using unfiltered real-world datasets, deep learning networks show the ability to not only learn spatio-temporal HVF changes but also to generate predictions for future HVFs up to 5.5 years, given only a single HVF.

Suggested Citation

  • Joanne C Wen & Cecilia S Lee & Pearse A Keane & Sa Xiao & Ariel S Rokem & Philip P Chen & Yue Wu & Aaron Y Lee, 2019. "Forecasting future Humphrey Visual Fields using deep learning," PLOS ONE, Public Library of Science, vol. 14(4), pages 1-14, April.
  • Handle: RePEc:plo:pone00:0214875
    DOI: 10.1371/journal.pone.0214875
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    References listed on IDEAS

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    2. Richard H. R. Hahnloser & Rahul Sarpeshkar & Misha A. Mahowald & Rodney J. Douglas & H. Sebastian Seung, 2000. "Digital selection and analogue amplification coexist in a cortex-inspired silicon circuit," Nature, Nature, vol. 405(6789), pages 947-951, June.
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