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Quantifying the Role of Population Subdivision in Evolution on Rugged Fitness Landscapes

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  • Anne-Florence Bitbol
  • David J Schwab

Abstract

Natural selection drives populations towards higher fitness, but crossing fitness valleys or plateaus may facilitate progress up a rugged fitness landscape involving epistasis. We investigate quantitatively the effect of subdividing an asexual population on the time it takes to cross a fitness valley or plateau. We focus on a generic and minimal model that includes only population subdivision into equivalent demes connected by global migration, and does not require significant size changes of the demes, environmental heterogeneity or specific geographic structure. We determine the optimal speedup of valley or plateau crossing that can be gained by subdivision, if the process is driven by the deme that crosses fastest. We show that isolated demes have to be in the sequential fixation regime for subdivision to significantly accelerate crossing. Using Markov chain theory, we obtain analytical expressions for the conditions under which optimal speedup is achieved: valley or plateau crossing by the subdivided population is then as fast as that of its fastest deme. We verify our analytical predictions through stochastic simulations. We demonstrate that subdivision can substantially accelerate the crossing of fitness valleys and plateaus in a wide range of parameters extending beyond the optimal window. We study the effect of varying the degree of subdivision of a population, and investigate the trade-off between the magnitude of the optimal speedup and the width of the parameter range over which it occurs. Our results, obtained for fitness valleys and plateaus, also hold for weakly beneficial intermediate mutations. Finally, we extend our work to the case of a population connected by migration to one or several smaller islands. Our results demonstrate that subdivision with migration alone can significantly accelerate the crossing of fitness valleys and plateaus, and shed light onto the quantitative conditions necessary for this to occur.Author Summary: Experimental evidence has recently been accumulating to suggest that fitness landscape ruggedness is common in a variety of organisms. Rugged landscapes arise from interactions between genetic variants, called epistasis, which can lead to fitness valleys or plateaus. The time needed to cross such fitness valleys or plateaus exhibits a rich dependence on population size, since stochastic effects have higher importance in small populations, increasing the probability of fixation of neutral or deleterious mutants. This may lead to an advantage of population subdivision, a possibility which has been strongly debated for nearly one hundred years. In this work, we quantitatively determine when, and to what extent, population subdivision accelerates valley and plateau crossing. Using the simple model of an asexual population subdivided into identical demes connected by gobal migration, we derive the conditions under which crossing by a subdivided population is driven by its fastest deme, thus giving rise to the maximal speedup. Our analytical predictions are verified using stochastic simulations. We investigate the effect of varying the degree of subdivision of a population. We generalize our results to weakly beneficial intermediates and to different population structures. We discuss the magnitude and robustness of the effect for realistic parameter values.

Suggested Citation

  • Anne-Florence Bitbol & David J Schwab, 2014. "Quantifying the Role of Population Subdivision in Evolution on Rugged Fitness Landscapes," PLOS Computational Biology, Public Library of Science, vol. 10(8), pages 1-15, August.
  • Handle: RePEc:plo:pcbi00:1003778
    DOI: 10.1371/journal.pcbi.1003778
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    1. Weissman, Daniel B. & Desai, Michael M. & Fisher, Daniel S. & Feldman, Marcus W., 2009. "The rate at which asexual populations cross fitness valleys," Theoretical Population Biology, Elsevier, vol. 75(4), pages 286-300.
    2. Michael S. Breen & Carsten Kemena & Peter K. Vlasov & Cedric Notredame & Fyodor A. Kondrashov, 2012. "Epistasis as the primary factor in molecular evolution," Nature, Nature, vol. 490(7421), pages 535-538, October.
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