Modeling Bi-modality Improves Characterization of Cell Cycle on Gene Expression in Single Cells
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DOI: 10.1371/journal.pcbi.1003696
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- Gregory J Boggy & Peter J Woolf, 2010. "A Mechanistic Model of PCR for Accurate Quantification of Quantitative PCR Data," PLOS ONE, Public Library of Science, vol. 5(8), pages 1-7, August.
- Nir Yosef & Alex K. Shalek & Jellert T. Gaublomme & Hulin Jin & Youjin Lee & Amit Awasthi & Chuan Wu & Katarzyna Karwacz & Sheng Xiao & Marsela Jorgolli & David Gennert & Rahul Satija & Arvind Shakya , 2013. "Dynamic regulatory network controlling TH17 cell differentiation," Nature, Nature, vol. 496(7446), pages 461-468, April.
- Duan, Naihua, et al, 1983. "A Comparison of Alternative Models for the Demand for Medical Care," Journal of Business & Economic Statistics, American Statistical Association, vol. 1(2), pages 115-126, April.
- Friedman, Jerome H. & Hastie, Trevor & Tibshirani, Rob, 2010. "Regularization Paths for Generalized Linear Models via Coordinate Descent," Journal of Statistical Software, Foundation for Open Access Statistics, vol. 33(i01).
- Cragg, John G, 1971. "Some Statistical Models for Limited Dependent Variables with Application to the Demand for Durable Goods," Econometrica, Econometric Society, vol. 39(5), pages 829-844, September.
- Alex K. Shalek & Rahul Satija & Xian Adiconis & Rona S. Gertner & Jellert T. Gaublomme & Raktima Raychowdhury & Schraga Schwartz & Nir Yosef & Christine Malboeuf & Diana Lu & John J. Trombetta & Dave , 2013. "Single-cell transcriptomics reveals bimodality in expression and splicing in immune cells," Nature, Nature, vol. 498(7453), pages 236-240, June.
- Jones, Andrew M, 1989. "A Double-Hurdle Model of Cigarette Consumption," Journal of Applied Econometrics, John Wiley & Sons, Ltd., vol. 4(1), pages 23-39, Jan.-Mar..
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Cited by:
- Yael Korem & Pablo Szekely & Yuval Hart & Hila Sheftel & Jean Hausser & Avi Mayo & Michael E Rothenberg & Tomer Kalisky & Uri Alon, 2015. "Geometry of the Gene Expression Space of Individual Cells," PLOS Computational Biology, Public Library of Science, vol. 11(7), pages 1-27, July.
- Brian DeVeale & Leqian Liu & Ryan Boileau & Jennifer Swindlehurst-Chan & Bryan Marsh & Jacob W. Freimer & Adam Abate & Robert Blelloch, 2022. "G1/S restriction point coordinates phasic gene expression and cell differentiation," Nature Communications, Nature, vol. 13(1), pages 1-17, December.
- Manikandan Narayanan & Andrew J Martins & John S Tsang, 2016. "Robust Inference of Cell-to-Cell Expression Variations from Single- and K-Cell Profiling," PLOS Computational Biology, Public Library of Science, vol. 12(7), pages 1-33, July.
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