Accurate Prediction of Peptide Binding Sites on Protein Surfaces
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Abstract
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DOI: 10.1371/journal.pcbi.1000335
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References listed on IDEAS
- Ja-Eun Kim & Junjie Chen & Zhenkun Lou, 2008. "DBC1 is a negative regulator of SIRT1," Nature, Nature, vol. 451(7178), pages 583-586, January.
- Doron Betel & Kevin E Breitkreuz & Ruth Isserlin & Danielle Dewar-Darch & Mike Tyers & Christopher W V Hogue, 2007. "Structure-Templated Predictions of Novel Protein Interactions from Sequence Information," PLOS Computational Biology, Public Library of Science, vol. 3(9), pages 1-7, September.
- Richard J Edwards & Norman E Davey & Denis C Shields, 2007. "SLiMFinder: A Probabilistic Method for Identifying Over-Represented, Convergently Evolved, Short Linear Motifs in Proteins," PLOS ONE, Public Library of Science, vol. 2(10), pages 1-11, October.
Citations
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Cited by:
- Iskra Staneva & Yongqi Huang & Zhirong Liu & Stefan Wallin, 2012. "Binding of Two Intrinsically Disordered Peptides to a Multi-Specific Protein: A Combined Monte Carlo and Molecular Dynamics Study," PLOS Computational Biology, Public Library of Science, vol. 8(9), pages 1-9, September.
- Mahdi Sarmady & William Dampier & Aydin Tozeren, 2011. "Sequence- and Interactome-Based Prediction of Viral Protein Hotspots Targeting Host Proteins: A Case Study for HIV Nef," PLOS ONE, Public Library of Science, vol. 6(6), pages 1-11, June.
- Iskra Staneva & Stefan Wallin, 2011. "Binding Free Energy Landscape of Domain-Peptide Interactions," PLOS Computational Biology, Public Library of Science, vol. 7(8), pages 1-9, August.
- Arnab Bhattacherjee & Stefan Wallin, 2013. "Exploring Protein-Peptide Binding Specificity through Computational Peptide Screening," PLOS Computational Biology, Public Library of Science, vol. 9(10), pages 1-10, October.
- Xinyi Liu & Bin Liu & Zhimin Huang & Ting Shi & Yingyi Chen & Jian Zhang, 2012. "SPPS: A Sequence-Based Method for Predicting Probability of Protein-Protein Interaction Partners," PLOS ONE, Public Library of Science, vol. 7(1), pages 1-6, January.
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