The temporal dynamics of lncRNA Firre-mediated epigenetic and transcriptional regulation
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DOI: 10.1038/s41467-024-50402-0
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- G. Bonora & X. Deng & H. Fang & V. Ramani & R. Qiu & J. B. Berletch & G. N. Filippova & Z. Duan & J. Shendure & W. S. Noble & C. M. Disteche, 2018. "Orientation-dependent Dxz4 contacts shape the 3D structure of the inactive X chromosome," Nature Communications, Nature, vol. 9(1), pages 1-17, December.
- Walter Georgescu & Alma Osseiran & Maria Rojec & Yueyong Liu & Maxime Bombrun & Jonathan Tang & Sylvain V Costes, 2015. "Characterizing the DNA Damage Response by Cell Tracking Algorithms and Cell Features Classification Using High-Content Time-Lapse Analysis," PLOS ONE, Public Library of Science, vol. 10(6), pages 1-17, June.
- A. Rasim Barutcu & Philipp G. Maass & Jordan P. Lewandowski & Catherine L. Weiner & John L. Rinn, 2018. "A TAD boundary is preserved upon deletion of the CTCF-rich Firre locus," Nature Communications, Nature, vol. 9(1), pages 1-11, December.
- Jordan P. Lewandowski & James C. Lee & Taeyoung Hwang & Hongjae Sunwoo & Jill M. Goldstein & Abigail F. Groff & Nydia P. Chang & William Mallard & Adam Williams & Jorge Henao-Meija & Richard A. Flavel, 2019. "The Firre locus produces a trans-acting RNA molecule that functions in hematopoiesis," Nature Communications, Nature, vol. 10(1), pages 1-13, December.
- Victor Heurtier & Nick Owens & Inma Gonzalez & Florian Mueller & Caroline Proux & Damien Mornico & Philippe Clerc & Agnes Dubois & Pablo Navarro, 2019. "The molecular logic of Nanog-induced self-renewal in mouse embryonic stem cells," Nature Communications, Nature, vol. 10(1), pages 1-15, December.
- Mitchell Guttman & John L. Rinn, 2012. "Modular regulatory principles of large non-coding RNAs," Nature, Nature, vol. 482(7385), pages 339-346, February.
- Ezgi Hacisuleyman & Chinmay J. Shukla & Catherine L. Weiner & John L. Rinn, 2016. "Function and evolution of local repeats in the Firre locus," Nature Communications, Nature, vol. 7(1), pages 1-12, April.
- Mitchell Guttman & Julie Donaghey & Bryce W. Carey & Manuel Garber & Jennifer K. Grenier & Glen Munson & Geneva Young & Anne Bergstrom Lucas & Robert Ach & Laurakay Bruhn & Xiaoping Yang & Ido Amit & , 2011. "lincRNAs act in the circuitry controlling pluripotency and differentiation," Nature, Nature, vol. 477(7364), pages 295-300, September.
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