IDEAS home Printed from https://ideas.repec.org/a/nat/natcom/v14y2023i1d10.1038_s41467-023-40817-6.html
   My bibliography  Save this article

Redox driven B12-ligand switch drives CarH photoresponse

Author

Listed:
  • Harshwardhan Poddar

    (University of Manchester)

  • Ronald Rios-Santacruz

    (Univ. Grenoble Alpes, CEA, CNRS, Institut de Biologie Structurale)

  • Derren J. Heyes

    (University of Manchester)

  • Muralidharan Shanmugam

    (University of Manchester)

  • Adam Brookfield

    (University of Manchester)

  • Linus O. Johannissen

    (University of Manchester)

  • Colin W. Levy

    (University of Manchester)

  • Laura N. Jeffreys

    (University of Manchester)

  • Shaowei Zhang

    (University of Manchester)

  • Michiyo Sakuma

    (University of Manchester)

  • Jacques-Philippe Colletier

    (Univ. Grenoble Alpes, CEA, CNRS, Institut de Biologie Structurale)

  • Sam Hay

    (University of Manchester)

  • Giorgio Schirò

    (Univ. Grenoble Alpes, CEA, CNRS, Institut de Biologie Structurale)

  • Martin Weik

    (Univ. Grenoble Alpes, CEA, CNRS, Institut de Biologie Structurale)

  • Nigel S. Scrutton

    (University of Manchester)

  • David Leys

    (University of Manchester)

Abstract

CarH is a coenzyme B12-dependent photoreceptor involved in regulating carotenoid biosynthesis. How light-triggered cleavage of the B12 Co-C bond culminates in CarH tetramer dissociation to initiate transcription remains unclear. Here, a series of crystal structures of the CarH B12-binding domain after illumination suggest formation of unforeseen intermediate states prior to tetramer dissociation. Unexpectedly, in the absence of oxygen, Co-C bond cleavage is followed by reorientation of the corrin ring and a switch from a lower to upper histidine-Co ligation, corresponding to a pentacoordinate state. Under aerobic conditions, rapid flash-cooling of crystals prior to deterioration upon illumination confirm a similar B12-ligand switch occurs. Removal of the upper His-ligating residue prevents monomer formation upon illumination. Combined with detailed solution spectroscopy and computational studies, these data demonstrate the CarH photoresponse integrates B12 photo- and redox-chemistry to drive large-scale conformational changes through stepwise Co-ligation changes.

Suggested Citation

  • Harshwardhan Poddar & Ronald Rios-Santacruz & Derren J. Heyes & Muralidharan Shanmugam & Adam Brookfield & Linus O. Johannissen & Colin W. Levy & Laura N. Jeffreys & Shaowei Zhang & Michiyo Sakuma & J, 2023. "Redox driven B12-ligand switch drives CarH photoresponse," Nature Communications, Nature, vol. 14(1), pages 1-14, December.
  • Handle: RePEc:nat:natcom:v:14:y:2023:i:1:d:10.1038_s41467-023-40817-6
    DOI: 10.1038/s41467-023-40817-6
    as

    Download full text from publisher

    File URL: https://www.nature.com/articles/s41467-023-40817-6
    File Function: Abstract
    Download Restriction: no

    File URL: https://libkey.io/10.1038/s41467-023-40817-6?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    References listed on IDEAS

    as
    1. Roger J. Kutta & Samantha J. O. Hardman & Linus O. Johannissen & Bruno Bellina & Hanan L. Messiha & Juan Manuel Ortiz-Guerrero & Montserrat Elías-Arnanz & S. Padmanabhan & Perdita Barran & Nigel S. Sc, 2015. "The photochemical mechanism of a B12-dependent photoreceptor protein," Nature Communications, Nature, vol. 6(1), pages 1-11, November.
    2. Maysam Mansouri & Marie-Didiée Hussherr & Tobias Strittmatter & Peter Buchmann & Shuai Xue & Gieri Camenisch & Martin Fussenegger, 2021. "Smart-watch-programmed green-light-operated percutaneous control of therapeutic transgenes," Nature Communications, Nature, vol. 12(1), pages 1-10, December.
    3. Marco Jost & Jésus Fernández-Zapata & María Carmen Polanco & Juan Manuel Ortiz-Guerrero & Percival Yang-Ting Chen & Gyunghoon Kang & S. Padmanabhan & Montserrat Elías-Arnanz & Catherine L. Drennan, 2015. "Structural basis for gene regulation by a B12-dependent photoreceptor," Nature, Nature, vol. 526(7574), pages 536-541, October.
    Full references (including those not matched with items on IDEAS)

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Shaowei Zhang & Laura N. Jeffreys & Harshwardhan Poddar & Yuqi Yu & Chuanyang Liu & Kaylee Patel & Linus O. Johannissen & Lingyun Zhu & Matthew J. Cliff & Cunyu Yan & Giorgio Schirò & Martin Weik & Mi, 2024. "Photocobilins integrate B12 and bilin photochemistry for enzyme control," Nature Communications, Nature, vol. 15(1), pages 1-16, December.
    2. Preetam Guha Ray & Debasis Maity & Jinbo Huang & Henryk Zulewski & Martin Fussenegger, 2023. "A versatile bioelectronic interface programmed for hormone sensing," Nature Communications, Nature, vol. 14(1), pages 1-15, December.
    3. Sally Wang & Chen-Yu Chen & John R. Rzasa & Chen-Yu Tsao & Jinyang Li & Eric VanArsdale & Eunkyoung Kim & Fauziah Rahma Zakaria & Gregory F. Payne & William E. Bentley, 2023. "Redox-enabled electronic interrogation and feedback control of hierarchical and networked biological systems," Nature Communications, Nature, vol. 14(1), pages 1-17, December.

    More about this item

    Statistics

    Access and download statistics

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:nat:natcom:v:14:y:2023:i:1:d:10.1038_s41467-023-40817-6. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Sonal Shukla or Springer Nature Abstracting and Indexing (email available below). General contact details of provider: http://www.nature.com .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.