IDEAS home Printed from https://ideas.repec.org/a/nat/natcom/v13y2022i1d10.1038_s41467-022-30201-1.html
   My bibliography  Save this article

Rectification and confinement of photokinetic bacteria in an optical feedback loop

Author

Listed:
  • Helena Massana-Cid

    (Sapienza Università di Roma)

  • Claudio Maggi

    (Sapienza Università di Roma
    Institute of Nanotechnology)

  • Giacomo Frangipane

    (Sapienza Università di Roma
    Fondazione Istituto Italiano di Tecnologia (IIT))

  • Roberto Di Leonardo

    (Sapienza Università di Roma
    Institute of Nanotechnology)

Abstract

Active particles can self-propel by exploiting locally available energy resources. When powered by light, these resources can be distributed with high resolution allowing spatio-temporal modulation of motility. Here we show that the random walks of light-driven bacteria are rectified when they swim in a structured light field that is obtained by a simple geometric transformation of a previous system snapshot. The obtained currents achieve an optimal value that we establish by general theoretical arguments. This optical feedback is used to gather and confine bacteria in high-density and high-activity regions that can be dynamically relocated and reconfigured. Moving away from the boundaries of these optically confined states, the density decays to zero in a few tens of micrometers, exhibiting steep exponential tails that suppress cell escape and ensure long-term stability. Our method is general and scalable, providing a versatile tool to produce localized and tunable active baths for microengineering applications and systematic studies of non-equilibrium phenomena in active systems.

Suggested Citation

  • Helena Massana-Cid & Claudio Maggi & Giacomo Frangipane & Roberto Di Leonardo, 2022. "Rectification and confinement of photokinetic bacteria in an optical feedback loop," Nature Communications, Nature, vol. 13(1), pages 1-8, December.
    • Handle: RePEc:nat:natcom:v:13:y:2022:i:1:d:10.1038_s41467-022-30201-1
    DOI: 10.1038/s41467-022-30201-1
    as

    Download full text from publisher

    File URL: https://www.nature.com/articles/s41467-022-30201-1
    File Function: Abstract
    Download Restriction: no
    File URL: https://libkey.io/10.1038/s41467-022-30201-1?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    References listed on IDEAS

    as
    1. Gaszton Vizsnyiczai & Giacomo Frangipane & Claudio Maggi & Filippo Saglimbeni & Silvio Bianchi & Roberto Di Leonardo, 2017. "Light controlled 3D micromotors powered by bacteria," Nature Communications, Nature, vol. 8(1), pages 1-7, December.
    2. Jochen Arlt & Vincent A. Martinez & Angela Dawson & Teuta Pilizota & Wilson C. K. Poon, 2018. "Painting with light-powered bacteria," Nature Communications, Nature, vol. 9(1), pages 1-7, December.
    3. Jochen Arlt & Vincent A. Martinez & Angela Dawson & Teuta Pilizota & Wilson C. K. Poon, 2019. "Dynamics-dependent density distribution in active suspensions," Nature Communications, Nature, vol. 10(1), pages 1-7, December.
    4. Celia Lozano & Clemens Bechinger, 2019. "Diffusing wave paradox of phototactic particles in traveling light pulses," Nature Communications, Nature, vol. 10(1), pages 1-9, December.
    5. F. Ginot & I. Theurkauff & F. Detcheverry & C. Ybert & C. Cottin-Bizonne, 2018. "Aggregation-fragmentation and individual dynamics of active clusters," Nature Communications, Nature, vol. 9(1), pages 1-9, December.
    6. Antoine Bricard & Jean-Baptiste Caussin & Nicolas Desreumaux & Olivier Dauchot & Denis Bartolo, 2013. "Emergence of macroscopic directed motion in populations of motile colloids," Nature, Nature, vol. 503(7474), pages 95-98, November.
    7. Celia Lozano & Borge ten Hagen & Hartmut Löwen & Clemens Bechinger, 2016. "Phototaxis of synthetic microswimmers in optical landscapes," Nature Communications, Nature, vol. 7(1), pages 1-10, November.
    8. N. Koumakis & A. Lepore & C. Maggi & R. Di Leonardo, 2013. "Targeted delivery of colloids by swimming bacteria," Nature Communications, Nature, vol. 4(1), pages 1-6, December.
    Full references (including those not matched with items on IDEAS)

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Noman Hanif Barbhuiya & A. G. Yodh & Chandan K. Mishra, 2023. "Direction-dependent dynamics of colloidal particle pairs and the Stokes-Einstein relation in quasi-two-dimensional fluids," Nature Communications, Nature, vol. 14(1), pages 1-8, December.
    2. Nicola Pellicciotta & Matteo Paoluzzi & Dario Buonomo & Giacomo Frangipane & Luca Angelani & Roberto Di Leonardo, 2023. "Colloidal transport by light induced gradients of active pressure," Nature Communications, Nature, vol. 14(1), pages 1-7, December.
    3. Alberto Dinelli & Jérémy O’Byrne & Agnese Curatolo & Yongfeng Zhao & Peter Sollich & Julien Tailleur, 2023. "Non-reciprocity across scales in active mixtures," Nature Communications, Nature, vol. 14(1), pages 1-10, December.
    4. Cristóvão S. Dias & Manish Trivedi & Giovanni Volpe & Nuno A. M. Araújo & Giorgio Volpe, 2023. "Environmental memory boosts group formation of clueless individuals," Nature Communications, Nature, vol. 14(1), pages 1-11, December.
    5. Maxime Hubert & Stéphane Perrard & Nicolas Vandewalle & Matthieu Labousse, 2022. "Overload wave-memory induces amnesia of a self-propelled particle," Nature Communications, Nature, vol. 13(1), pages 1-9, December.
    6. Chepizhko, Oleksandr & Kulinskii, Vladimir, 2014. "The hydrodynamic description for the system of self-propelled particles: Ideal Viscek fluid," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 415(C), pages 493-502.
    7. Hao Wu & Xiangyi Meng & Michael M. Danziger & Sean P. Cornelius & Hui Tian & Albert-László Barabási, 2022. "Fragmentation of outage clusters during the recovery of power distribution grids," Nature Communications, Nature, vol. 13(1), pages 1-7, December.
    8. Federico Pratissoli & Andreagiovanni Reina & Yuri Kaszubowski Lopes & Carlo Pinciroli & Genki Miyauchi & Lorenzo Sabattini & Roderich Groß, 2023. "Coherent movement of error-prone individuals through mechanical coupling," Nature Communications, Nature, vol. 14(1), pages 1-13, December.
    9. David T. Limmer & Chloe Y. Gao & Anthony R. Poggioli, 2021. "A large deviation theory perspective on nanoscale transport phenomena," The European Physical Journal B: Condensed Matter and Complex Systems, Springer;EDP Sciences, vol. 94(7), pages 1-16, July.
    10. Bibi Najma & Minu Varghese & Lev Tsidilkovski & Linnea Lemma & Aparna Baskaran & Guillaume Duclos, 2022. "Competing instabilities reveal how to rationally design and control active crosslinked gels," Nature Communications, Nature, vol. 13(1), pages 1-10, December.
    11. Matthew S. E. Peterson & Aparna Baskaran & Michael F. Hagan, 2021. "Vesicle shape transformations driven by confined active filaments," Nature Communications, Nature, vol. 12(1), pages 1-9, December.
    12. Chung Wing Chan & Daihui Wu & Kaiyao Qiao & Kin Long Fong & Zhiyu Yang & Yilong Han & Rui Zhang, 2024. "Chiral active particles are sensitive reporters to environmental geometry," Nature Communications, Nature, vol. 15(1), pages 1-11, December.
    13. Bo Zhang & Andreas Glatz & Igor S. Aranson & Alexey Snezhko, 2023. "Spontaneous shock waves in pulse-stimulated flocks of Quincke rollers," Nature Communications, Nature, vol. 14(1), pages 1-8, December.
    14. Stephen Williams & Raphaël Jeanneret & Idan Tuval & Marco Polin, 2022. "Confinement-induced accumulation and de-mixing of microscopic active-passive mixtures," Nature Communications, Nature, vol. 13(1), pages 1-8, December.
    15. Solenn Riedel & Ludwig A. Hoffmann & Luca Giomi & Daniela J. Kraft, 2024. "Designing highly efficient interlocking interactions in anisotropic active particles," Nature Communications, Nature, vol. 15(1), pages 1-9, December.
    16. Dai, X. & Kovalenko, K. & Molodyk, M. & Wang, Z. & Li, X. & Musatov, D. & Raigorodskii, A.M. & Alfaro-Bittner, K. & Cooper, G.D. & Bianconi, G. & Boccaletti, S., 2021. "D-dimensional oscillators in simplicial structures: Odd and even dimensions display different synchronization scenarios," Chaos, Solitons & Fractals, Elsevier, vol. 146(C).
    17. Nguyen, Minh D.N. & Pham, Phuc H. & Ngo, Khang V. & Do, Van H. & Li, Shengkai & Phan, Trung V., 2024. "Remark on the entropy production of adaptive run-and-tumble chemotaxis," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 634(C).
    18. Antoine Aubret & Quentin Martinet & Jeremie Palacci, 2021. "Metamachines of pluripotent colloids," Nature Communications, Nature, vol. 12(1), pages 1-9, December.
    19. Jens Grauer & Falko Schmidt & Jesús Pineda & Benjamin Midtvedt & Hartmut Löwen & Giovanni Volpe & Benno Liebchen, 2021. "Active droploids," Nature Communications, Nature, vol. 12(1), pages 1-8, December.
    20. Guevara-Valadez, Carlos Antonio & Marathe, Rahul & Gomez-Solano, Juan Ruben, 2023. "A Brownian cyclic engine operating in a viscoelastic active suspension," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 609(C).

    More about this item

    Statistics

    Access and download statistics

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:nat:natcom:v:13:y:2022:i:1:d:10.1038_s41467-022-30201-1. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Sonal Shukla or Springer Nature Abstracting and Indexing (email available below). General contact details of provider: http://www.nature.com .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.