Reference-free cell type deconvolution of multi-cellular pixel-resolution spatially resolved transcriptomics data
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DOI: 10.1038/s41467-022-30033-z
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- Haojia Wu & Eryn E. Dixon & Qiao Xuanyuan & Juanru Guo & Yasuhiro Yoshimura & Chitnis Debashish & Anezka Niesnerova & Hao Xu & Morgane Rouault & Benjamin D. Humphreys, 2024. "High resolution spatial profiling of kidney injury and repair using RNA hybridization-based in situ sequencing," Nature Communications, Nature, vol. 15(1), pages 1-16, December.
- Kalen Clifton & Manjari Anant & Gohta Aihara & Lyla Atta & Osagie K. Aimiuwu & Justus M. Kebschull & Michael I. Miller & Daniel Tward & Jean Fan, 2023. "STalign: Alignment of spatial transcriptomics data using diffeomorphic metric mapping," Nature Communications, Nature, vol. 14(1), pages 1-14, December.
- Haoyang Li & Juexiao Zhou & Zhongxiao Li & Siyuan Chen & Xingyu Liao & Bin Zhang & Ruochi Zhang & Yu Wang & Shiwei Sun & Xin Gao, 2023. "A comprehensive benchmarking with practical guidelines for cellular deconvolution of spatial transcriptomics," Nature Communications, Nature, vol. 14(1), pages 1-10, December.
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