Guide RNAs containing universal bases enable Cas9/Cas12a recognition of polymorphic sequences
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DOI: 10.1038/s41467-022-29202-x
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- Yao-Cheng Lin & Morgane Boone & Leander Meuris & Irma Lemmens & Nadine Van Roy & Arne Soete & Joke Reumers & Matthieu Moisse & Stéphane Plaisance & Radoje Drmanac & Jason Chen & Frank Speleman & Dieth, 2014. "Genome dynamics of the human embryonic kidney 293 lineage in response to cell biology manipulations," Nature Communications, Nature, vol. 5(1), pages 1-12, December.
- Fernando Orden Rueda & Michal Bista & Matthew D. Newton & Anne U. Goeppert & M. Emanuela Cuomo & Euan Gordon & Felix Kröner & Jon A. Read & Jonathan D. Wrigley & David Rueda & Benjamin J. M. Taylor, 2017. "Mapping the sugar dependency for rational generation of a DNA-RNA hybrid-guided Cas9 endonuclease," Nature Communications, Nature, vol. 8(1), pages 1-11, December.
- Suresh Ramakrishna & Seung Woo Cho & Sojung Kim & Myungjae Song & Ramu Gopalappa & Jin-Soo Kim & Hyongbum Kim, 2014. "Surrogate reporter-based enrichment of cells containing RNA-guided Cas9 nuclease-induced mutations," Nature Communications, Nature, vol. 5(1), pages 1-10, May.
- Christopher R. Cromwell & Keewon Sung & Jinho Park & Amanda R. Krysler & Juan Jovel & Seong Keun Kim & Basil P. Hubbard, 2018. "Incorporation of bridged nucleic acids into CRISPR RNAs improves Cas9 endonuclease specificity," Nature Communications, Nature, vol. 9(1), pages 1-11, December.
- Omar O. Abudayyeh & Jonathan S. Gootenberg & Patrick Essletzbichler & Shuo Han & Julia Joung & Joseph J. Belanto & Vanessa Verdine & David B. T. Cox & Max J. Kellner & Aviv Regev & Eric S. Lander & Da, 2017. "RNA targeting with CRISPR–Cas13," Nature, Nature, vol. 550(7675), pages 280-284, October.
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- Guanhua Xun & Zhixin Zhu & Nilmani Singh & Jingxia Lu & Piyush K. Jain & Huimin Zhao, 2024. "Harnessing noncanonical crRNA for highly efficient genome editing," Nature Communications, Nature, vol. 15(1), pages 1-13, December.
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