Thousands of Qatari genomes inform human migration history and improve imputation of Arab haplotypes
Author
Abstract
Suggested Citation
DOI: 10.1038/s41467-021-25287-y
Download full text from publisher
References listed on IDEAS
- Swapan Mallick & Heng Li & Mark Lipson & Iain Mathieson & Melissa Gymrek & Fernando Racimo & Mengyao Zhao & Niru Chennagiri & Susanne Nordenfelt & Arti Tandon & Pontus Skoglund & Iosif Lazaridis & Sri, 2016. "The Simons Genome Diversity Project: 300 genomes from 142 diverse populations," Nature, Nature, vol. 538(7624), pages 201-206, October.
- Iosif Lazaridis & Dani Nadel & Gary Rollefson & Deborah C. Merrett & Nadin Rohland & Swapan Mallick & Daniel Fernandes & Mario Novak & Beatriz Gamarra & Kendra Sirak & Sarah Connell & Kristin Stewards, 2016. "Genomic insights into the origin of farming in the ancient Near East," Nature, Nature, vol. 536(7617), pages 419-424, August.
- Jie Huang & Bryan Howie & Shane McCarthy & Yasin Memari & Klaudia Walter & Josine L. Min & Petr Danecek & Giovanni Malerba & Elisabetta Trabetti & Hou-Feng Zheng & Giovanni Gambaro & J. Brent Richards, 2015. "Improved imputation of low-frequency and rare variants using the UK10K haplotype reference panel," Nature Communications, Nature, vol. 6(1), pages 1-9, November.
- Iosif Lazaridis & Nick Patterson & Alissa Mittnik & Gabriel Renaud & Swapan Mallick & Karola Kirsanow & Peter H. Sudmant & Joshua G. Schraiber & Sergi Castellano & Mark Lipson & Bonnie Berger & Christ, 2014. "Ancient human genomes suggest three ancestral populations for present-day Europeans," Nature, Nature, vol. 513(7518), pages 409-413, September.
- Katsuhiko Mineta & Kosuke Goto & Takashi Gojobori & Fowzan S Alkuraya, 2021. "Population structure of indigenous inhabitants of Arabia," PLOS Genetics, Public Library of Science, vol. 17(1), pages 1-18, January.
- Rasika Ann Mathias & Margaret A. Taub & Christopher R. Gignoux & Wenqing Fu & Shaila Musharoff & Timothy D. O'Connor & Candelaria Vergara & Dara G. Torgerson & Maria Pino-Yanes & Suyash S. Shringarpur, 2016. "A continuum of admixture in the Western Hemisphere revealed by the African Diaspora genome," Nature Communications, Nature, vol. 7(1), pages 1-10, November.
- Olivier Delaneau & Jonathan Marchini, 2014. "Integrating sequence and array data to create an improved 1000 Genomes Project haplotype reference panel," Nature Communications, Nature, vol. 5(1), pages 1-9, September.
- Danish Saleheen & Pradeep Natarajan & Irina M. Armean & Wei Zhao & Asif Rasheed & Sumeet A. Khetarpal & Hong-Hee Won & Konrad J. Karczewski & Anne H. O’Donnell-Luria & Kaitlin E. Samocha & Benjamin We, 2017. "Human knockouts and phenotypic analysis in a cohort with a high rate of consanguinity," Nature, Nature, vol. 544(7649), pages 235-239, April.
- Gaurav Thareja & Yasser Al-Sarraj & Aziz Belkadi & Maryam Almotawa & Karsten Suhre & Omar M. E. Albagha, 2021. "Whole genome sequencing in the Middle Eastern Qatari population identifies genetic associations with 45 clinically relevant traits," Nature Communications, Nature, vol. 12(1), pages 1-10, December.
- David Reich & Kumarasamy Thangaraj & Nick Patterson & Alkes L. Price & Lalji Singh, 2009. "Reconstructing Indian population history," Nature, Nature, vol. 461(7263), pages 489-494, September.
- Andrés Moreno-Estrada & Simon Gravel & Fouad Zakharia & Jacob L McCauley & Jake K Byrnes & Christopher R Gignoux & Patricia A Ortiz-Tello & Ricardo J Martínez & Dale J Hedges & Richard W Morris & Cele, 2013. "Reconstructing the Population Genetic History of the Caribbean," PLOS Genetics, Public Library of Science, vol. 9(11), pages 1-19, November.
- Joseph K Pickrell & Jonathan K Pritchard, 2012. "Inference of Population Splits and Mixtures from Genome-Wide Allele Frequency Data," PLOS Genetics, Public Library of Science, vol. 8(11), pages 1-17, November.
Most related items
These are the items that most often cite the same works as this one and are cited by the same works as this one.- Leonardo Vallini & Carlo Zampieri & Mohamed Javad Shoaee & Eugenio Bortolini & Giulia Marciani & Serena Aneli & Telmo Pievani & Stefano Benazzi & Alberto Barausse & Massimo Mezzavilla & Michael D. Pet, 2024. "The Persian plateau served as hub for Homo sapiens after the main out of Africa dispersal," Nature Communications, Nature, vol. 15(1), pages 1-13, December.
- Chi-Chun Liu & David Witonsky & Anna Gosling & Ju Hyeon Lee & Harald Ringbauer & Richard Hagan & Nisha Patel & Raphaela Stahl & John Novembre & Mark Aldenderfer & Christina Warinner & Anna Di Rienzo &, 2022. "Ancient genomes from the Himalayas illuminate the genetic history of Tibetans and their Tibeto-Burman speaking neighbors," Nature Communications, Nature, vol. 13(1), pages 1-14, December.
- Mateus H. Gouveia & Amy R. Bentley & Thiago P. Leal & Eduardo Tarazona-Santos & Carlos D. Bustamante & Adebowale A. Adeyemo & Charles N. Rotimi & Daniel Shriner, 2023. "Unappreciated subcontinental admixture in Europeans and European Americans and implications for genetic epidemiology studies," Nature Communications, Nature, vol. 14(1), pages 1-11, December.
- Buzbas, Erkan Ozge & Verdu, Paul, 2018. "Inference on admixture fractions in a mechanistic model of recurrent admixture," Theoretical Population Biology, Elsevier, vol. 122(C), pages 149-157.
- Maciej Chyleński & Przemysław Makarowicz & Anna Juras & Maja Krzewińska & Łukasz Pospieszny & Edvard Ehler & Agnieszka Breszka & Jacek Górski & Halina Taras & Anita Szczepanek & Marta Polańska & Piotr, 2023. "Patrilocality and hunter-gatherer-related ancestry of populations in East-Central Europe during the Middle Bronze Age," Nature Communications, Nature, vol. 14(1), pages 1-12, December.
- Douglas J. Kennett & Mark Lipson & Keith M. Prufer & David Mora-Marín & Richard J. George & Nadin Rohland & Mark Robinson & Willa R. Trask & Heather H. J. Edgar & Ethan C. Hill & Erin E. Ray & Paige L, 2022. "South-to-north migration preceded the advent of intensive farming in the Maya region," Nature Communications, Nature, vol. 13(1), pages 1-10, December.
- Kendra A. Sirak & Daniel M. Fernandes & Mark Lipson & Swapan Mallick & Matthew Mah & Iñigo Olalde & Harald Ringbauer & Nadin Rohland & Carla S. Hadden & Éadaoin Harney & Nicole Adamski & Rebecca Berna, 2021. "Social stratification without genetic differentiation at the site of Kulubnarti in Christian Period Nubia," Nature Communications, Nature, vol. 12(1), pages 1-14, December.
- Owen Alexander Higgins & Alessandra Modi & Costanza Cannariato & Maria Angela Diroma & Federico Lugli & Stefano Ricci & Valentina Zaro & Stefania Vai & Antonino Vazzana & Matteo Romandini & He Yu & Fr, 2024. "Life history and ancestry of the late Upper Palaeolithic infant from Grotta delle Mura, Italy," Nature Communications, Nature, vol. 15(1), pages 1-16, December.
- Kai Yuan & Xumin Ni & Chang Liu & Yuwen Pan & Lian Deng & Rui Zhang & Yang Gao & Xueling Ge & Jiaojiao Liu & Xixian Ma & Haiyi Lou & Taoyang Wu & Shuhua Xu, 2021. "Refining models of archaic admixture in Eurasia with ArchaicSeeker 2.0," Nature Communications, Nature, vol. 12(1), pages 1-15, December.
- Pei-Kuan Cong & Wei-Yang Bai & Jin-Chen Li & Meng-Yuan Yang & Saber Khederzadeh & Si-Rui Gai & Nan Li & Yu-Heng Liu & Shi-Hui Yu & Wei-Wei Zhao & Jun-Quan Liu & Yi Sun & Xiao-Wei Zhu & Pian-Pian Zhao , 2022. "Genomic analyses of 10,376 individuals in the Westlake BioBank for Chinese (WBBC) pilot project," Nature Communications, Nature, vol. 13(1), pages 1-15, December.
- David B. Stern & Nathan W. Anderson & Juanita A. Diaz & Carol Eunmi Lee, 2022. "Genome-wide signatures of synergistic epistasis during parallel adaptation in a Baltic Sea copepod," Nature Communications, Nature, vol. 13(1), pages 1-14, December.
- Injeong Shim & Hiroyuki Kuwahara & NingNing Chen & Mais O. Hashem & Lama AlAbdi & Mohamed Abouelhoda & Hong-Hee Won & Pradeep Natarajan & Patrick T. Ellinor & Amit V. Khera & Xin Gao & Fowzan S. Alkur, 2023. "Clinical utility of polygenic scores for cardiometabolic disease in Arabs," Nature Communications, Nature, vol. 14(1), pages 1-11, December.
- Jeffrey D. Wall & J. Fah Sathirapongsasuti & Ravi Gupta & Asif Rasheed & Radha Venkatesan & Saurabh Belsare & Ramesh Menon & Sameer Phalke & Anuradha Mittal & John Fang & Deepak Tanneeru & Manjari Des, 2023. "South Asian medical cohorts reveal strong founder effects and high rates of homozygosity," Nature Communications, Nature, vol. 14(1), pages 1-11, December.
- Lejla Kovacevic & Kristiina Tambets & Anne-Mai Ilumäe & Alena Kushniarevich & Bayazit Yunusbayev & Anu Solnik & Tamer Bego & Dragan Primorac & Vedrana Skaro & Andreja Leskovac & Zlatko Jakovski & Katj, 2014. "Standing at the Gateway to Europe - The Genetic Structure of Western Balkan Populations Based on Autosomal and Haploid Markers," PLOS ONE, Public Library of Science, vol. 9(8), pages 1-15, August.
- Thomas L. Schmidt & Nancy M. Endersby-Harshman & Anthony R. J. Rooyen & Michelle Katusele & Rebecca Vinit & Leanne J. Robinson & Moses Laman & Stephan Karl & Ary A. Hoffmann, 2024. "Global, asynchronous partial sweeps at multiple insecticide resistance genes in Aedes mosquitoes," Nature Communications, Nature, vol. 15(1), pages 1-19, December.
- Bárbara Sousa da Mota & Simone Rubinacci & Diana Ivette Cruz Dávalos & Carlos Eduardo G. Amorim & Martin Sikora & Niels N. Johannsen & Marzena H. Szmyt & Piotr Włodarczak & Anita Szczepanek & Marcin M, 2023. "Imputation of ancient human genomes," Nature Communications, Nature, vol. 14(1), pages 1-17, December.
- Sam Tallman & Maria das Dores Sungo & Sílvio Saranga & Sandra Beleza, 2023. "Whole genomes from Angola and Mozambique inform about the origins and dispersals of major African migrations," Nature Communications, Nature, vol. 14(1), pages 1-14, December.
- Soraggi, Samuele & Wiuf, Carsten, 2019. "General theory for stochastic admixture graphs and F-statistics," Theoretical Population Biology, Elsevier, vol. 125(C), pages 56-66.
- Humberto García-Ortiz & Francisco Barajas-Olmos & Cecilia Contreras-Cubas & Miguel Ángel Cid-Soto & Emilio J. Córdova & Federico Centeno-Cruz & Elvia Mendoza-Caamal & Isabel Cicerón-Arellano & Marlen , 2021. "The genomic landscape of Mexican Indigenous populations brings insights into the peopling of the Americas," Nature Communications, Nature, vol. 12(1), pages 1-12, December.
- Elena Arciero & Sufyan A. Dogra & Daniel S. Malawsky & Massimo Mezzavilla & Theofanis Tsismentzoglou & Qin Qin Huang & Karen A. Hunt & Dan Mason & Saghira Malik Sharif & David A. Heel & Eamonn Sherida, 2021. "Fine-scale population structure and demographic history of British Pakistanis," Nature Communications, Nature, vol. 12(1), pages 1-16, December.
Corrections
All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:nat:natcom:v:12:y:2021:i:1:d:10.1038_s41467-021-25287-y. See general information about how to correct material in RePEc.
If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.
If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .
If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.
For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Sonal Shukla or Springer Nature Abstracting and Indexing (email available below). General contact details of provider: http://www.nature.com .
Please note that corrections may take a couple of weeks to filter through the various RePEc services.