General theory for stochastic admixture graphs and F-statistics
Author
Abstract
Suggested Citation
DOI: 10.1016/j.tpb.2018.12.002
Download full text from publisher
As the access to this document is restricted, you may want to search for a different version of it.
References listed on IDEAS
- Steffen L. Lauritzen & Thomas S. Richardson, 2002. "Chain graph models and their causal interpretations," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 64(3), pages 321-348, August.
- George Nicholson & Albert V. Smith & Frosti Jónsson & Ómar Gústafsson & Kári Stefánsson & Peter Donnelly, 2002. "Assessing population differentiation and isolation from single‐nucleotide polymorphism data," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 64(4), pages 695-715, October.
- Joseph K Pickrell & Jonathan K Pritchard, 2012. "Inference of Population Splits and Mixtures from Genome-Wide Allele Frequency Data," PLOS Genetics, Public Library of Science, vol. 8(11), pages 1-17, November.
- Mathieu Gautier & Toby Dylan Hocking & Jean-Louis Foulley, 2010. "A Bayesian Outlier Criterion to Detect SNPs under Selection in Large Data Sets," PLOS ONE, Public Library of Science, vol. 5(8), pages 1-16, August.
- David Reich & Kumarasamy Thangaraj & Nick Patterson & Alkes L. Price & Lalji Singh, 2009. "Reconstructing Indian population history," Nature, Nature, vol. 461(7263), pages 489-494, September.
- Pontus Skoglund & Swapan Mallick & Maria Cátira Bortolini & Niru Chennagiri & Tábita Hünemeier & Maria Luiza Petzl-Erler & Francisco Mauro Salzano & Nick Patterson & David Reich, 2015. "Genetic evidence for two founding populations of the Americas," Nature, Nature, vol. 525(7567), pages 104-108, September.
Most related items
These are the items that most often cite the same works as this one and are cited by the same works as this one.- Buzbas, Erkan Ozge & Verdu, Paul, 2018. "Inference on admixture fractions in a mechanistic model of recurrent admixture," Theoretical Population Biology, Elsevier, vol. 122(C), pages 149-157.
- Alejandro Ochoa & John D Storey, 2021. "Estimating FST and kinship for arbitrary population structures," PLOS Genetics, Public Library of Science, vol. 17(1), pages 1-36, January.
- Humberto García-Ortiz & Francisco Barajas-Olmos & Cecilia Contreras-Cubas & Miguel Ángel Cid-Soto & Emilio J. Córdova & Federico Centeno-Cruz & Elvia Mendoza-Caamal & Isabel Cicerón-Arellano & Marlen , 2021. "The genomic landscape of Mexican Indigenous populations brings insights into the peopling of the Americas," Nature Communications, Nature, vol. 12(1), pages 1-12, December.
- Elena Arciero & Sufyan A. Dogra & Daniel S. Malawsky & Massimo Mezzavilla & Theofanis Tsismentzoglou & Qin Qin Huang & Karen A. Hunt & Dan Mason & Saghira Malik Sharif & David A. Heel & Eamonn Sherida, 2021. "Fine-scale population structure and demographic history of British Pakistanis," Nature Communications, Nature, vol. 12(1), pages 1-16, December.
- Leonardo Vallini & Carlo Zampieri & Mohamed Javad Shoaee & Eugenio Bortolini & Giulia Marciani & Serena Aneli & Telmo Pievani & Stefano Benazzi & Alberto Barausse & Massimo Mezzavilla & Michael D. Pet, 2024. "The Persian plateau served as hub for Homo sapiens after the main out of Africa dispersal," Nature Communications, Nature, vol. 15(1), pages 1-13, December.
- Rozaimi Mohamad Razali & Juan Rodriguez-Flores & Mohammadmersad Ghorbani & Haroon Naeem & Waleed Aamer & Elbay Aliyev & Ali Jubran & Andrew G. Clark & Khalid A. Fakhro & Younes Mokrab, 2021. "Thousands of Qatari genomes inform human migration history and improve imputation of Arab haplotypes," Nature Communications, Nature, vol. 12(1), pages 1-16, December.
- David B. Stern & Nathan W. Anderson & Juanita A. Diaz & Carol Eunmi Lee, 2022. "Genome-wide signatures of synergistic epistasis during parallel adaptation in a Baltic Sea copepod," Nature Communications, Nature, vol. 13(1), pages 1-14, December.
- Hobolth, Asger & Siren, Jukka, 2016. "The multivariate Wright–Fisher process with mutation: Moment-based analysis and inference using a hierarchical Beta model," Theoretical Population Biology, Elsevier, vol. 108(C), pages 36-50.
- Lejla Kovacevic & Kristiina Tambets & Anne-Mai Ilumäe & Alena Kushniarevich & Bayazit Yunusbayev & Anu Solnik & Tamer Bego & Dragan Primorac & Vedrana Skaro & Andreja Leskovac & Zlatko Jakovski & Katj, 2014. "Standing at the Gateway to Europe - The Genetic Structure of Western Balkan Populations Based on Autosomal and Haploid Markers," PLOS ONE, Public Library of Science, vol. 9(8), pages 1-15, August.
- Thomas L. Schmidt & Nancy M. Endersby-Harshman & Anthony R. J. Rooyen & Michelle Katusele & Rebecca Vinit & Leanne J. Robinson & Moses Laman & Stephan Karl & Ary A. Hoffmann, 2024. "Global, asynchronous partial sweeps at multiple insecticide resistance genes in Aedes mosquitoes," Nature Communications, Nature, vol. 15(1), pages 1-19, December.
- Heng Du & Lei Zhou & Zhen Liu & Yue Zhuo & Meilin Zhang & Qianqian Huang & Shiyu Lu & Kai Xing & Li Jiang & Jian-Feng Liu, 2024. "The 1000 Chinese Indigenous Pig Genomes Project provides insights into the genomic architecture of pigs," Nature Communications, Nature, vol. 15(1), pages 1-18, December.
- Gyaneshwer Chaubey & Anurag Kadian & Saroj Bala & Vadlamudi Raghavendra Rao, 2015. "Genetic Affinity of the Bhil, Kol and Gond Mentioned in Epic Ramayana," PLOS ONE, Public Library of Science, vol. 10(6), pages 1-11, June.
- Michael Bridges & Elizabeth A Heron & Colm O'Dushlaine & Ricardo Segurado & The International Schizophrenia Consortium (ISC) & Derek Morris & Aiden Corvin & Michael Gill & Carlos Pinto, 2011. "Genetic Classification of Populations Using Supervised Learning," PLOS ONE, Public Library of Science, vol. 6(5), pages 1-12, May.
- Yiran Zhang & Andrew Ying & Steve Edland & Lon White & Ronghui Xu, 2024. "Marginal Structural Illness-Death Models for Semi-competing Risks Data," Statistics in Biosciences, Springer;International Chinese Statistical Association, vol. 16(3), pages 668-692, December.
- Alexandros G. Sotiropoulos & Epifanía Arango-Isaza & Tomohiro Ban & Chiara Barbieri & Salim Bourras & Christina Cowger & Paweł C. Czembor & Roi Ben-David & Amos Dinoor & Simon R. Ellwood & Johannes Gr, 2022. "Global genomic analyses of wheat powdery mildew reveal association of pathogen spread with historical human migration and trade," Nature Communications, Nature, vol. 13(1), pages 1-14, December.
- S Justin Carlus & Saumya Sarkar & Sandeep Kumar Bansal & Vertika Singh & Kiran Singh & Rajesh Kumar Jha & Nirmala Sadasivam & Sri Revathy Sadasivam & P S Gireesha & Kumarasamy Thangaraj & Singh Rajend, 2016. "Is MTHFR 677 C>T Polymorphism Clinically Important in Polycystic Ovarian Syndrome (PCOS)? A Case-Control Study, Meta-Analysis and Trial Sequential Analysis," PLOS ONE, Public Library of Science, vol. 11(3), pages 1-15, March.
- Nick Patterson & Alkes L Price & David Reich, 2006. "Population Structure and Eigenanalysis," PLOS Genetics, Public Library of Science, vol. 2(12), pages 1-20, December.
- Keith Hunley & Kiela Gwin & Brendan Liberman, 2016. "A Reassessment of the Impact of European Contact on the Structure of Native American Genetic Diversity," PLOS ONE, Public Library of Science, vol. 11(8), pages 1-17, August.
- Zhijun Wu & Yuqing Lou & Wei Jin & Yan Liu & Lin Lu & Guoping Lu, 2012. "The Pro12Ala Polymorphism in the Peroxisome Proliferator-Activated Receptor Gamma-2 Gene (PPARγ2) Is Associated with Increased Risk of Coronary Artery Disease: A Meta-Analysis," PLOS ONE, Public Library of Science, vol. 7(12), pages 1-14, December.
- Javier Pérez & A. Sánchez, 2011.
"Is there a signalling role for public wages? Evidence for the euro area based on macro data,"
Empirical Economics, Springer, vol. 41(2), pages 421-445, October.
- Javier J. Pérez & A. Jesús Sánchez, 2009. "Is there a signalling role for public wages? Evidence for the euro area based on macro data," Working Papers 0934, Banco de España.
- Pérez, Javier J. & Sánchez, Jesús, 2010. "Is there a signalling role for public wages? Evidence for the euro area based on macro data," Working Paper Series 1148, European Central Bank.
More about this item
Keywords
Introgression; Genetic drift; Wright–Fisher model; Heterozygosity; F-statistic; Markov graphical model;All these keywords.
Statistics
Access and download statisticsCorrections
All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:eee:thpobi:v:125:y:2019:i:c:p:56-66. See general information about how to correct material in RePEc.
If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.
If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .
If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.
For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Catherine Liu (email available below). General contact details of provider: https://www.journals.elsevier.com/intelligence .
Please note that corrections may take a couple of weeks to filter through the various RePEc services.