IDEAS home Printed from https://ideas.repec.org/a/nat/natcom/v12y2021i1d10.1038_s41467-021-24586-8.html
   My bibliography  Save this article

Signatures of mitonuclear coevolution in a warbler species complex

Author

Listed:
  • Silu Wang

    (University of British Columbia
    University of California)

  • Madelyn J. Ore

    (University of British Columbia
    Cornell Lab of Ornithology)

  • Else K. Mikkelsen

    (University of British Columbia
    University of Toronto)

  • Julie Lee-Yaw

    (University of British Columbia
    University of Lethbridge)

  • David P. L. Toews

    (The Pennsylvania State University)

  • Sievert Rohwer

    (University of Washington)

  • Darren Irwin

    (University of British Columbia)

Abstract

Divergent mitonuclear coadaptation could facilitate speciation. We investigate this possibility in two hybridizing species of warblers, Setophaga occidentalis and S. townsendi, in western North America. Inland S. townsendi harbor distinct mitochondrial DNA haplotypes from those of S. occidentalis. These populations also differ in several nuclear DNA regions. Coastal S. townsendi demonstrate mixed mitonuclear ancestry from S. occidentalis and inland S. townsendi. Of the few highly-differentiated chromosomal regions between inland S. townsendi and S. occidentalis, a 1.2 Mb gene block on chromosome 5 is also differentiated between coastal and inland S. townsendi. Genes in this block are associated with fatty acid oxidation and energy-related signaling transduction, thus linked to mitochondrial functions. Genetic variation within this candidate gene block covaries with mitochondrial DNA and shows signatures of divergent selection. Spatial variation in mitonuclear ancestries is correlated with climatic conditions. Together, these observations suggest divergent mitonuclear coadaptation underpins cryptic differentiation in this species complex.

Suggested Citation

  • Silu Wang & Madelyn J. Ore & Else K. Mikkelsen & Julie Lee-Yaw & David P. L. Toews & Sievert Rohwer & Darren Irwin, 2021. "Signatures of mitonuclear coevolution in a warbler species complex," Nature Communications, Nature, vol. 12(1), pages 1-11, December.
    • Handle: RePEc:nat:natcom:v:12:y:2021:i:1:d:10.1038_s41467-021-24586-8
    DOI: 10.1038/s41467-021-24586-8
    as

    Download full text from publisher

    File URL: https://www.nature.com/articles/s41467-021-24586-8
    File Function: Abstract
    Download Restriction: no
    File URL: https://libkey.io/10.1038/s41467-021-24586-8?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    References listed on IDEAS

    as
    1. Godfrey Hewitt, 2000. "The genetic legacy of the Quaternary ice ages," Nature, Nature, vol. 405(6789), pages 907-913, June.
    Full references (including those not matched with items on IDEAS)

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Ilaria Bernabò & Viviana Cittadino & Sandro Tripepi & Vittoria Marchianò & Sandro Piazzini & Maurizio Biondi & Mattia Iannella, 2022. "Updating Distribution, Ecology, and Hotspots for Three Amphibian Species to Set Conservation Priorities in a European Glacial Refugium," Land, MDPI, vol. 11(8), pages 1-19, August.
    2. Silvia Marková & Hayley C. Lanier & Marco A. Escalante & Marcos O. R. Cruz & Michaela Horníková & Mateusz Konczal & Lawrence J. Weider & Jeremy B. Searle & Petr Kotlík, 2023. "Local adaptation and future climate vulnerability in a wild rodent," Nature Communications, Nature, vol. 14(1), pages 1-11, December.
    3. Sandra Garcés-Pastor & Eric Coissac & Sébastien Lavergne & Christoph Schwörer & Jean-Paul Theurillat & Peter D. Heintzman & Owen S. Wangensteen & Willy Tinner & Fabian Rey & Martina Heer & Astrid Rutz, 2022. "High resolution ancient sedimentary DNA shows that alpine plant diversity is associated with human land use and climate change," Nature Communications, Nature, vol. 13(1), pages 1-16, December.
    4. Fahim Arshad & Muhammad Waheed & Kaneez Fatima & Nidaa Harun & Muhammad Iqbal & Kaniz Fatima & Shaheena Umbreen, 2022. "Predicting the Suitable Current and Future Potential Distribution of the Native Endangered Tree Tecomella undulata (Sm.) Seem. in Pakistan," Sustainability, MDPI, vol. 14(12), pages 1-10, June.
    5. Hallatschek, Oskar & Nelson, David R., 2008. "Gene surfing in expanding populations," Theoretical Population Biology, Elsevier, vol. 73(1), pages 158-170.
    6. Connor M. French & Laura D. Bertola & Ana C. Carnaval & Evan P. Economo & Jamie M. Kass & David J. Lohman & Katharine A. Marske & Rudolf Meier & Isaac Overcast & Andrew J. Rominger & Phillip P. A. Sta, 2023. "Global determinants of insect mitochondrial genetic diversity," Nature Communications, Nature, vol. 14(1), pages 1-15, December.
    7. Amaël Borzée & Kevin R Messenger & Shinhyeok Chae & Desiree Andersen & Jordy Groffen & Ye Inn Kim & Junghwa An & Siti N Othman & Kyongsin Ri & Tu Yong Nam & Yoonhyuk Bae & Jin-Long Ren & Jia-Tang Li &, 2020. "Yellow sea mediated segregation between North East Asian Dryophytes species," PLOS ONE, Public Library of Science, vol. 15(6), pages 1-34, June.
    8. Guindon, Stéphane & Guo, Hongbin & Welch, David, 2016. "Demographic inference under the coalescent in a spatial continuum," Theoretical Population Biology, Elsevier, vol. 111(C), pages 43-50.
    9. Yogesh K. Gupta & Francismar C. Marcelino-Guimarães & Cécile Lorrain & Andrew Farmer & Sajeet Haridas & Everton Geraldo Capote Ferreira & Valéria S. Lopes-Caitar & Liliane Santana Oliveira & Emmanuell, 2023. "Major proliferation of transposable elements shaped the genome of the soybean rust pathogen Phakopsora pachyrhizi," Nature Communications, Nature, vol. 14(1), pages 1-16, December.
    10. Gregory Thom & Marcelo Gehara & Brian Tilston Smith & Cristina Y. Miyaki & Fábio Raposo Amaral, 2021. "Microevolutionary dynamics show tropical valleys are deeper for montane birds of the Atlantic Forest," Nature Communications, Nature, vol. 12(1), pages 1-10, December.
    11. David G. Green, 2023. "Emergence in complex networks of simple agents," Journal of Economic Interaction and Coordination, Springer;Society for Economic Science with Heterogeneous Interacting Agents, vol. 18(3), pages 419-462, July.
    12. Yvonne Willi & Kay Lucek & Olivier Bachmann & Nora Walden, 2022. "Recent speciation associated with range expansion and a shift to self-fertilization in North American Arabidopsis," Nature Communications, Nature, vol. 13(1), pages 1-10, December.
    13. Artur Akhmetov & Ruslan Ianbaev & Svetlana Boronnikova & Yulai Yanbaev & Aygul Gabitova & Aleksey Kulagin, 2021. "Norway maple (Acer platanoides) and pedunculate oak (Quercus robur) demonstrate different patterns of genetic variation within and among populations on the eastern border of distribution ranges," Journal of Forest Science, Czech Academy of Agricultural Sciences, vol. 67(11), pages 522-532.
    14. Mauricio Campos & Bo Li & Guillaume Lafontaine & Joseph Napier & Feng Sheng Hu, 2024. "Integrating Different Data Sources Using a Bayesian Hierarchical Model to Unveil Glacial Refugia," Journal of Agricultural, Biological and Environmental Statistics, Springer;The International Biometric Society;American Statistical Association, vol. 29(3), pages 576-600, September.
    15. Jan Smyčka & Anna Toszogyova & David Storch, 2023. "The relationship between geographic range size and rates of species diversification," Nature Communications, Nature, vol. 14(1), pages 1-13, December.
    16. Catarina Rato & David James Harris & Ana Perera & Silvia B Carvalho & Miguel A Carretero & Dennis Rödder, 2015. "A Combination of Divergence and Conservatism in the Niche Evolution of the Moorish Gecko, Tarentola mauritanica (Gekkota: Phyllodactylidae)," PLOS ONE, Public Library of Science, vol. 10(5), pages 1-16, May.
    17. Hirzi Luqman & Daniel Wegmann & Simone Fior & Alex Widmer, 2023. "Climate-induced range shifts drive adaptive response via spatio-temporal sieving of alleles," Nature Communications, Nature, vol. 14(1), pages 1-15, December.
    18. Kobayashi, Yutaka & Ohtsuki, Hisashi, 2014. "Evolution of social versus individual learning in a subdivided population revisited: Comparative analysis of three coexistence mechanisms using the inclusive-fitness method," Theoretical Population Biology, Elsevier, vol. 92(C), pages 78-87.
    19. Lee Beers & Lisa J. Rowland & Francis Drummond, 2019. "Genetic Diversity of Lowbush Blueberry throughout the United States in Managed and Non-Managed Populations," Agriculture, MDPI, vol. 9(6), pages 1-14, May.
    20. Arayaselassie Abebe Semu & Tamrat Bekele & Ermias Lulekal & Paloma Cariñanos & Sileshi Nemomissa, 2021. "Projected Impact of Climate Change on Habitat Suitability of a Vulnerable Endemic Vachellia negrii (pic.serm.) kyal. & Boatwr (Fabaceae) in Ethiopia," Sustainability, MDPI, vol. 13(20), pages 1-16, October.

    More about this item

    Statistics

    Access and download statistics

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:nat:natcom:v:12:y:2021:i:1:d:10.1038_s41467-021-24586-8. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Sonal Shukla or Springer Nature Abstracting and Indexing (email available below). General contact details of provider: http://www.nature.com .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.