IDEAS home Printed from https://ideas.repec.org/a/gam/jmathe/v9y2021i6p625-d517630.html
   My bibliography  Save this article

Mathematical and Statistical Analysis of Doubling Times to Investigate the Early Spread of Epidemics: Application to the COVID-19 Pandemic

Author

Listed:
  • Alexandra Smirnova

    (Department of Mathematics & Statistics, Georgia State University, Atlanta, GA 30302, USA)

  • Linda DeCamp

    (Department of Mathematics & Statistics, Georgia State University, Atlanta, GA 30302, USA)

  • Gerardo Chowell

    (Department of Population Health Sciences, School of Public Health, Georgia State University, Atlanta, GA 30302, USA)

Abstract

Simple mathematical tools are needed to quantify the threat posed by emerging and re-emerging infectious disease outbreaks using minimal data capturing the outbreak trajectory. Here we use mathematical analysis, simulation and COVID-19 epidemic data to demonstrate a novel approach to numerically and mathematically characterize the rate at which the doubling time of an epidemic is changing over time. For this purpose, we analyze the dynamics of epidemic doubling times during the initial epidemic stage, defined as the sequence of times at which the cumulative incidence doubles. We introduce new methodology to characterize epidemic threats by analyzing the evolution of epidemics as a function of (1) the number of times the epidemic doubles until the epidemic peak is reached and (2) the rate at which the doubling times increase. In our doubling-time approach, the most dangerous epidemic threats double in size many times and the doubling times change at a relatively low rate (e.g., doubling times remain nearly invariant) whereas the least transmissible threats double in size only a few times and the doubling times rapidly increases in the period of emergence. We derive analytical formulas and test and illustrate our methodology using synthetic and COVID-19 epidemic data. Our mathematical analysis demonstrates that the series of epidemic doubling times increase approximately according to an exponential function with a rate that quantifies the rate of change of the doubling times. Our analytic results are in excellent agreement with numerical results. Our methodology offers a simple and intuitive approach that relies on minimal outbreak trajectory data to characterize the threat posed by emerging and re-emerging infectious diseases.

Suggested Citation

  • Alexandra Smirnova & Linda DeCamp & Gerardo Chowell, 2021. "Mathematical and Statistical Analysis of Doubling Times to Investigate the Early Spread of Epidemics: Application to the COVID-19 Pandemic," Mathematics, MDPI, vol. 9(6), pages 1-10, March.
  • Handle: RePEc:gam:jmathe:v:9:y:2021:i:6:p:625-:d:517630
    as

    Download full text from publisher

    File URL: https://www.mdpi.com/2227-7390/9/6/625/pdf
    Download Restriction: no

    File URL: https://www.mdpi.com/2227-7390/9/6/625/
    Download Restriction: no
    ---><---

    References listed on IDEAS

    as
    1. Duncan J. Watts & Steven H. Strogatz, 1998. "Collective dynamics of ‘small-world’ networks," Nature, Nature, vol. 393(6684), pages 440-442, June.
    2. J. O. Lloyd-Smith & S. J. Schreiber & P. E. Kopp & W. M. Getz, 2005. "Superspreading and the effect of individual variation on disease emergence," Nature, Nature, vol. 438(7066), pages 355-359, November.
    Full references (including those not matched with items on IDEAS)

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Tardy, Olivia & Lenglos, Christophe & Lai, Sandra & Berteaux, Dominique & Leighton, Patrick A., 2023. "Rabies transmission in the Arctic: An agent-based model reveals the effects of broad-scale movement strategies on contact risk between Arctic foxes," Ecological Modelling, Elsevier, vol. 476(C).
    2. Huan Wang & Chuang Ma & Han-Shuang Chen & Ying-Cheng Lai & Hai-Feng Zhang, 2022. "Full reconstruction of simplicial complexes from binary contagion and Ising data," Nature Communications, Nature, vol. 13(1), pages 1-10, December.
    3. Wei Zhong, 2017. "Simulating influenza pandemic dynamics with public risk communication and individual responsive behavior," Computational and Mathematical Organization Theory, Springer, vol. 23(4), pages 475-495, December.
    4. Vinayak, & Raghuvanshi, Adarsh & kshitij, Avinash, 2023. "Signatures of capacity development through research collaborations in artificial intelligence and machine learning," Journal of Informetrics, Elsevier, vol. 17(1).
    5. Supriya Tiwari & Pallavi Basu, 2024. "Quasi-randomization tests for network interference," Papers 2403.16673, arXiv.org, revised Oct 2024.
    6. Anzhi Sheng & Qi Su & Aming Li & Long Wang & Joshua B. Plotkin, 2023. "Constructing temporal networks with bursty activity patterns," Nature Communications, Nature, vol. 14(1), pages 1-10, December.
    7. Samrachana Adhikari & Beau Dabbs, 2018. "Social Network Analysis in R: A Software Review," Journal of Educational and Behavioral Statistics, , vol. 43(2), pages 225-253, April.
    8. Wang, Xiaojie & Slamu, Wushour & Guo, Wenqiang & Wang, Sixiu & Ren, Yan, 2022. "A novel semi local measure of identifying influential nodes in complex networks," Chaos, Solitons & Fractals, Elsevier, vol. 158(C).
    9. Lin, Dan & Wu, Jiajing & Xuan, Qi & Tse, Chi K., 2022. "Ethereum transaction tracking: Inferring evolution of transaction networks via link prediction," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 600(C).
    10. Moshe B Hoshen & Anthony H Burton & Themis J V Bowcock, 2007. "Simulating disease transmission dynamics at a multi-scale level," International Journal of Microsimulation, International Microsimulation Association, vol. 1(1), pages 26-34.
    11. Ferreira, D.S.R. & Ribeiro, J. & Oliveira, P.S.L. & Pimenta, A.R. & Freitas, R.P. & Dutra, R.S. & Papa, A.R.R. & Mendes, J.F.F., 2022. "Spatiotemporal analysis of earthquake occurrence in synthetic and worldwide data," Chaos, Solitons & Fractals, Elsevier, vol. 165(P2).
    12. Luc E. Coffeng & Sake J. de Vlas, 2022. "Predicting epidemics and the impact of interventions in heterogeneous settings: Standard SEIR models are too pessimistic," Journal of the Royal Statistical Society Series A, Royal Statistical Society, vol. 185(S1), pages 28-35, November.
    13. Mario V. Tomasello & Mauro Napoletano & Antonios Garas & Frank Schweitzer, 2017. "The rise and fall of R&D networks," Industrial and Corporate Change, Oxford University Press and the Associazione ICC, vol. 26(4), pages 617-646.
    14. Qinghu Liao & Wenwen Dong & Boxin Zhao, 2023. "A New Strategy to Solve “the Tragedy of the Commons” in Sustainable Grassland Ecological Compensation: Experience from Inner Mongolia, China," Sustainability, MDPI, vol. 15(12), pages 1-24, June.
    15. Joseph B. Bak-Coleman & Ian Kennedy & Morgan Wack & Andrew Beers & Joseph S. Schafer & Emma S. Spiro & Kate Starbird & Jevin D. West, 2022. "Combining interventions to reduce the spread of viral misinformation," Nature Human Behaviour, Nature, vol. 6(10), pages 1372-1380, October.
    16. Xinyu Huang & Dongming Chen & Dongqi Wang & Tao Ren, 2020. "MINE: Identifying Top- k Vital Nodes in Complex Networks via Maximum Influential Neighbors Expansion," Mathematics, MDPI, vol. 8(9), pages 1-25, August.
    17. Xueguo Xu & Chen Xu & Wenxin Zhang, 2022. "Research on the Destruction Resistance of Giant Urban Rail Transit Network from the Perspective of Vulnerability," Sustainability, MDPI, vol. 14(12), pages 1-26, June.
    18. Jianhong Chen & Hongcai Ma & Shan Yang, 2023. "SEIOR Rumor Propagation Model Considering Hesitating Mechanism and Different Rumor-Refuting Ways in Complex Networks," Mathematics, MDPI, vol. 11(2), pages 1-22, January.
    19. Xiaokun Su & Chenrouyu Zheng & Yefei Yang & Yafei Yang & Wen Zhao & Yue Yu, 2022. "Spatial Structure and Development Patterns of Urban Traffic Flow Network in Less Developed Areas: A Sustainable Development Perspective," Sustainability, MDPI, vol. 14(13), pages 1-18, July.
    20. Kris V. Parag & Robin N. Thompson & Christl A. Donnelly, 2022. "Are epidemic growth rates more informative than reproduction numbers?," Journal of the Royal Statistical Society Series A, Royal Statistical Society, vol. 185(S1), pages 5-15, November.

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:gam:jmathe:v:9:y:2021:i:6:p:625-:d:517630. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: MDPI Indexing Manager (email available below). General contact details of provider: https://www.mdpi.com .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.