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REML estimation for binary data in GLMMs

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  • Noh, Maengseok
  • Lee, Youngjo

Abstract

The restricted maximum likelihood (REML) procedure is useful for inferences about variance components in mixed linear models. However, its extension to hierarchical generalized linear models (HGLMs) is often hampered by analytically intractable integrals. Numerical integration such as Gauss-Hermite quadrature (GHQ) is generally not recommended when the dimensionality of the integral is high. With binary data various extensions of the REML method have been suggested, but they have had unsatisfactory biases in estimation. In this paper we propose a statistically and computationally efficient REML procedure for the analysis of binary data, which is applicable over a wide class of models and design structures. We propose a bias-correction method for models such as binary matched pairs and discuss how the REML estimating equations for mixed linear models can be modified to implement more general models.

Suggested Citation

  • Noh, Maengseok & Lee, Youngjo, 2007. "REML estimation for binary data in GLMMs," Journal of Multivariate Analysis, Elsevier, vol. 98(5), pages 896-915, May.
    • Handle: RePEc:eee:jmvana:v:98:y:2007:i:5:p:896-915
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    References listed on IDEAS

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    1. Thomas R. Ten Have & A. Russell Localio, 1999. "Empirical Bayes Estimation of Random Effects Parameters in Mixed Effects Logistic Regression Models," Biometrics, The International Biometric Society, vol. 55(4), pages 1022-1029, December.
    2. Il Do Ha & Youngjo Lee, 2005. "Comparison of hierarchical likelihood versus orthodox best linear unbiased predictor approaches for frailty models," Biometrika, Biometrika Trust, vol. 92(3), pages 717-723, September.
    3. Yun, Sungcheol & Lee, Youngjo, 2004. "Comparison of hierarchical and marginal likelihood estimators for binary outcomes," Computational Statistics & Data Analysis, Elsevier, vol. 45(3), pages 639-650, April.
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    Citations

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    Cited by:

    1. Meza, Cristian & Jaffrézic, Florence & Foulley, Jean-Louis, 2009. "Estimation in the probit normal model for binary outcomes using the SAEM algorithm," Computational Statistics & Data Analysis, Elsevier, vol. 53(4), pages 1350-1360, February.
    2. Håvard Rue & Sara Martino & Nicolas Chopin, 2009. "Approximate Bayesian inference for latent Gaussian models by using integrated nested Laplace approximations," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 71(2), pages 319-392, April.
    3. Jin, Shaobo & Lee, Youngjo, 2024. "Standard error estimates in hierarchical generalized linear models," Computational Statistics & Data Analysis, Elsevier, vol. 189(C).
    4. Noh, Maengseok & Lee, Youngjo, 2008. "Hierarchical-likelihood approach for nonlinear mixed-effects models," Computational Statistics & Data Analysis, Elsevier, vol. 52(7), pages 3517-3527, March.
    5. Ruggero Bellio & Nicola Soriani, 2021. "Maximum likelihood estimation based on the Laplace approximation for p2 network regression models," Statistica Neerlandica, Netherlands Society for Statistics and Operations Research, vol. 75(1), pages 24-41, February.
    6. Noh, Maengseok & Wu, Lang & Lee, Youngjo, 2012. "Hierarchical likelihood methods for nonlinear and generalized linear mixed models with missing data and measurement errors in covariates," Journal of Multivariate Analysis, Elsevier, vol. 109(C), pages 42-51.
    7. Jessica A. Fujii & Katherine Ralls & Martin Tim Tinker, 2015. "Ecological drivers of variation in tool-use frequency across sea otter populations," Behavioral Ecology, International Society for Behavioral Ecology, vol. 26(2), pages 519-526.
    8. Sumanta Adhya & Tathagata Banerjee & Gaurangadeb Chattopadhyay, 2012. "Inference on finite population categorical response: nonparametric regression-based predictive approach," AStA Advances in Statistical Analysis, Springer;German Statistical Society, vol. 96(1), pages 69-98, January.
    9. Lee, Woojoo & Shi, Jian Qing & Lee, Youngjo, 2010. "Approximate conditional inference in mixed-effects models with binary data," Computational Statistics & Data Analysis, Elsevier, vol. 54(1), pages 173-184, January.
    10. Youngjo Lee & Myoungjin Jang & Woojoo Lee, 2011. "Prediction interval for disease mapping using hierarchical likelihood," Computational Statistics, Springer, vol. 26(1), pages 159-179, March.
    11. Chan, Moon-tong & Yu, Dalei & Yau, Kelvin K.W., 2015. "Multilevel cumulative logistic regression model with random effects: Application to British social attitudes panel survey data," Computational Statistics & Data Analysis, Elsevier, vol. 88(C), pages 173-186.
    12. Yu, Dalei & Yau, Kelvin K.W., 2012. "Conditional Akaike information criterion for generalized linear mixed models," Computational Statistics & Data Analysis, Elsevier, vol. 56(3), pages 629-644.
    13. Joe, Harry, 2008. "Accuracy of Laplace approximation for discrete response mixed models," Computational Statistics & Data Analysis, Elsevier, vol. 52(12), pages 5066-5074, August.
    14. Sun-Joo Cho & Paul Boeck & Susan Embretson & Sophia Rabe-Hesketh, 2014. "Additive Multilevel Item Structure Models with Random Residuals: Item Modeling for Explanation and Item Generation," Psychometrika, Springer;The Psychometric Society, vol. 79(1), pages 84-104, January.
    15. repec:jss:jstsof:39:i13 is not listed on IDEAS
    16. Han, Jeongseop & Lee, Youngjo, 2024. "Enhanced Laplace approximation," Journal of Multivariate Analysis, Elsevier, vol. 202(C).
    17. Cho, S.-J. & Rabe-Hesketh, S., 2011. "Alternating imputation posterior estimation of models with crossed random effects," Computational Statistics & Data Analysis, Elsevier, vol. 55(1), pages 12-25, January.
    18. Lara Maleyeff & Fan Li & Sebastien Haneuse & Rui Wang, 2023. "Assessing exposure‐time treatment effect heterogeneity in stepped‐wedge cluster randomized trials," Biometrics, The International Biometric Society, vol. 79(3), pages 2551-2564, September.
    19. Il Do Ha & Liming Xiang & Mengjiao Peng & Jong-Hyeon Jeong & Youngjo Lee, 2020. "Frailty modelling approaches for semi-competing risks data," Lifetime Data Analysis: An International Journal Devoted to Statistical Methods and Applications for Time-to-Event Data, Springer, vol. 26(1), pages 109-133, January.
    20. Andersson, Björn & Jin, Shaobo & Zhang, Maoxin, 2023. "Fast estimation of multiple group generalized linear latent variable models for categorical observed variables," Computational Statistics & Data Analysis, Elsevier, vol. 182(C).

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