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High-dimensional linear discriminant analysis using nonparametric methods

Author

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  • Park, Hoyoung
  • Baek, Seungchul
  • Park, Junyong

Abstract

The classification of high-dimensional data is a very important problem that has been studied for a long time. Many studies have proposed linear classifiers based on Fisher’s linear discriminant rule (LDA) which consists of estimating the unknown covariance matrix and the mean vector of each group. In particular, if the data dimension p is larger than the number of observations n(p>n), the sample covariance matrix cannot be a good estimator of the covariance matrix due to the well-known rank deficiency. To solve this problem, many studies proposed methods by modifying the LDA classifier through diagonalization or regularization of covariance matrix. In this paper, we categorize existing methods into three cases and discuss the shortcomings of each method. To compensate for these shortcomings, our baseline idea is that we consider estimation of the high dimensional mean vector and covariance matrix altogether while existing methods focus on shrinkage estimator of either mean vector or covariance matrix. We provide theoretical result that the proposed method is successful in both sparse and dense situations of the mean vector structures. In contrast, some existing methods work well only under specific situations. We also present numerical studies that our methods outperform existing methods through various simulation studies and real data examples such as electroencephalogy (EEG), gene expression microarray, and Spectro datasets.

Suggested Citation

  • Park, Hoyoung & Baek, Seungchul & Park, Junyong, 2022. "High-dimensional linear discriminant analysis using nonparametric methods," Journal of Multivariate Analysis, Elsevier, vol. 188(C).
  • Handle: RePEc:eee:jmvana:v:188:y:2022:i:c:s0047259x21001147
    DOI: 10.1016/j.jmva.2021.104836
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    References listed on IDEAS

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    1. Kubokawa, Tatsuya & Srivastava, Muni S., 2008. "Estimation of the precision matrix of a singular Wishart distribution and its application in high-dimensional data," Journal of Multivariate Analysis, Elsevier, vol. 99(9), pages 1906-1928, October.
    2. Feng, Long & Dicker, Lee H., 2018. "Approximate nonparametric maximum likelihood for mixture models: A convex optimization approach to fitting arbitrary multivariate mixing distributions," Computational Statistics & Data Analysis, Elsevier, vol. 122(C), pages 80-91.
    3. Lee H. Dicker & Sihai D. Zhao, 2016. "High-dimensional classification via nonparametric empirical Bayes and maximum likelihood inference," Biometrika, Biometrika Trust, vol. 103(1), pages 21-34.
    4. Jianqing Fan & Yang Feng & Xin Tong, 2012. "A road to classification in high dimensional space: the regularized optimal affine discriminant," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 74(4), pages 745-771, September.
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