IDEAS home Printed from https://ideas.repec.org/a/eee/ecomod/v297y2015icp171-179.html
   My bibliography  Save this article

Combining distribution modelling and non-invasive genetics to improve range shift forecasting

Author

Listed:
  • Mestre, Frederico
  • Pita, Ricardo
  • Paupério, Joana
  • Martins, Filipa M.S.
  • Alves, Paulo Célio
  • Mira, António
  • Beja, Pedro

Abstract

Forecasting species range shifts under climate change is critical to adapt conservation strategies to future environmental conditions. Ecological niche models (ENMs) are often used to achieve this goal, but their accuracy is limited when species niches are inadequately sampled. This problem may be tackled by combining ENM with field validation to fine-tune current species distribution, though the traditional methods are often time-consuming and the species ID inaccurate. Here we combine ENM with novel field validation methods based on non-invasive genetic sampling to forecast range shifts in the globally near-threatened Cabrera vole (Microtus cabrerae). Using occurrence records mapped at 10km×10km resolution, we built the first ENM (ENM1) to estimate the current species distribution. We then selected 40 grid squares with no previous data along the predicted range margins, and surveyed suitable habitats through presence-sign searches. Faecal samples visually assigned to the species were collected for genetic identification based on the mitochondrial cytochrome-b gene, which resulted in 19 new grid squares with confirmed presence records. The second model (ENM2) was built by adding the new data, and species distribution maps predicted by each model under current and future climate change scenarios were compared. Both models had high predictive ability, with strong influence of temperature and precipitation. Although current distribution ranges predicted by each model were quite similar, the range shifts predicted under climate change differed greatly when using additional field data. In particular, ENM1 overlooked areas identified as important by ENM2 for species conservation in the future. Overall, results suggest that combining ENM with non-invasive genetics may provide a cost-effective approach in studies regarding species conservation under environmental change.

Suggested Citation

  • Mestre, Frederico & Pita, Ricardo & Paupério, Joana & Martins, Filipa M.S. & Alves, Paulo Célio & Mira, António & Beja, Pedro, 2015. "Combining distribution modelling and non-invasive genetics to improve range shift forecasting," Ecological Modelling, Elsevier, vol. 297(C), pages 171-179.
  • Handle: RePEc:eee:ecomod:v:297:y:2015:i:c:p:171-179
    DOI: 10.1016/j.ecolmodel.2014.11.018
    as

    Download full text from publisher

    File URL: http://www.sciencedirect.com/science/article/pii/S0304380014005912
    Download Restriction: Full text for ScienceDirect subscribers only

    File URL: https://libkey.io/10.1016/j.ecolmodel.2014.11.018?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    As the access to this document is restricted, you may want to search for a different version of it.

    References listed on IDEAS

    as
    1. Freeman, Elizabeth A. & Moisen, Gretchen, 2008. "PresenceAbsence: An R Package for Presence Absence Analysis," Journal of Statistical Software, Foundation for Open Access Statistics, vol. 23(i11).
    2. Barbosa, A. Márcia & Real, Raimundo & Mario Vargas, J., 2009. "Transferability of environmental favourability models in geographic space: The case of the Iberian desman (Galemys pyrenaicus) in Portugal and Spain," Ecological Modelling, Elsevier, vol. 220(5), pages 747-754.
    3. Roubicek, A.J. & VanDerWal, J. & Beaumont, L.J. & Pitman, A.J. & Wilson, P. & Hughes, L., 2010. "Does the choice of climate baseline matter in ecological niche modelling?," Ecological Modelling, Elsevier, vol. 221(19), pages 2280-2286.
    4. Gian-Reto Walther & Eric Post & Peter Convey & Annette Menzel & Camille Parmesan & Trevor J. C. Beebee & Jean-Marc Fromentin & Ove Hoegh-Guldberg & Franz Bairlein, 2002. "Ecological responses to recent climate change," Nature, Nature, vol. 416(6879), pages 389-395, March.
    Full references (including those not matched with items on IDEAS)

    Citations

    Citations are extracted by the CitEc Project, subscribe to its RSS feed for this item.
    as


    Cited by:

    1. Mestre, Frederico & Risk, Benjamin B. & Mira, António & Beja, Pedro & Pita, Ricardo, 2017. "A metapopulation approach to predict species range shifts under different climate change and landscape connectivity scenarios," Ecological Modelling, Elsevier, vol. 359(C), pages 406-414.

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Mayeul Dalleau & Stéphane Ciccione & Jeanne A Mortimer & Julie Garnier & Simon Benhamou & Jérôme Bourjea, 2012. "Nesting Phenology of Marine Turtles: Insights from a Regional Comparative Analysis on Green Turtle (Chelonia mydas)," PLOS ONE, Public Library of Science, vol. 7(10), pages 1-13, October.
    2. Monika Punia & Suman Nain & Amit Kumar & Bhupendra Singh & Amit Prakash & Krishan Kumar & V. Jain, 2015. "Analysis of temperature variability over north-west part of India for the period 1970–2000," Natural Hazards: Journal of the International Society for the Prevention and Mitigation of Natural Hazards, Springer;International Society for the Prevention and Mitigation of Natural Hazards, vol. 75(1), pages 935-952, January.
    3. Feng Dong & Chih-Ming Hung & Shou-Hsien Li & Xiao-Jun Yang, 2021. "Potential Himalayan community turnover through the Late Pleistocene," Climatic Change, Springer, vol. 164(1), pages 1-10, January.
    4. Chan, Nathan & Wichman, Casey, 2017. "The Effects of Climate on Leisure Demand: Evidence from North America," RFF Working Paper Series 17-20, Resources for the Future.
    5. Richter, Andries & Grasman, Johan, 2013. "The transmission of sustainable harvesting norms when agents are conditionally cooperative," Ecological Economics, Elsevier, vol. 93(C), pages 202-209.
    6. A. Kosanic & S. Harrison & K. Anderson & I. Kavcic, 2014. "Present and historical climate variability in South West England," Climatic Change, Springer, vol. 124(1), pages 221-237, May.
    7. Marchetto, Elisa & Da Re, Daniele & Tordoni, Enrico & Bazzichetto, Manuele & Zannini, Piero & Celebrin, Simone & Chieffallo, Ludovico & Malavasi, Marco & Rocchini, Duccio, 2023. "Testing the effect of sample prevalence and sampling methods on probability- and favourability-based SDMs," Ecological Modelling, Elsevier, vol. 477(C).
    8. Andrew J Allyn & Michael A Alexander & Bradley S Franklin & Felix Massiot-Granier & Andrew J Pershing & James D Scott & Katherine E Mills, 2020. "Comparing and synthesizing quantitative distribution models and qualitative vulnerability assessments to project marine species distributions under climate change," PLOS ONE, Public Library of Science, vol. 15(4), pages 1-28, April.
    9. Nye, Janet A. & Gamble, Robert J. & Link, Jason S., 2013. "The relative impact of warming and removing top predators on the Northeast US large marine biotic community," Ecological Modelling, Elsevier, vol. 264(C), pages 157-168.
    10. Ernesto Azzurro & Paula Moschella & Francesc Maynou, 2011. "Tracking Signals of Change in Mediterranean Fish Diversity Based on Local Ecological Knowledge," PLOS ONE, Public Library of Science, vol. 6(9), pages 1-8, September.
    11. Fei, Teng & Skidmore, Andrew K. & Venus, Valentijn & Wang, Tiejun & Toxopeus, Bert & Bian, Meng & Liu, Yaolin, 2012. "Predicting micro thermal habitat of lizards in a dynamic thermal environment," Ecological Modelling, Elsevier, vol. 231(C), pages 126-133.
    12. Ralf C Buckley & J Guy Castley & Fernanda de Vasconcellos Pegas & Alexa C Mossaz & Rochelle Steven, 2012. "A Population Accounting Approach to Assess Tourism Contributions to Conservation of IUCN-Redlisted Mammal Species," PLOS ONE, Public Library of Science, vol. 7(9), pages 1-8, September.
    13. Guarino, Ernestino de Souza Gomes & Barbosa, Ana Márcia & Waechter, Jorge Luiz, 2012. "Occurrence and abundance models of threatened plant species: Applications to mitigate the impact of hydroelectric power dams," Ecological Modelling, Elsevier, vol. 230(C), pages 22-33.
    14. Aagaard, Kevin J. & Thogmartin, Wayne E. & Lonsdorf, Eric V., 2018. "Temperature-influenced energetics model for migrating waterfowl," Ecological Modelling, Elsevier, vol. 378(C), pages 46-58.
    15. Zhou, P. & Wang, M., 2016. "Carbon dioxide emissions allocation: A review," Ecological Economics, Elsevier, vol. 125(C), pages 47-59.
    16. Akpoti, Komlavi & Groen, Thomas & Dossou-Yovo, Elliott & Kabo-bah, Amos T. & Zwart, Sander J., 2022. "Climate change-induced reduction in agricultural land suitability of West-Africa's inland valley landscapes," Agricultural Systems, Elsevier, vol. 200(C).
    17. Hu, Saiquan & Jia, Xiao & Zhang, Xiaojin & Zheng, Xiaoying & Zhu, Junming, 2017. "How political ideology affects climate perception: Moderation effects of time orientation and knowledge," Resources, Conservation & Recycling, Elsevier, vol. 127(C), pages 124-131.
    18. Sillero, Neftalí & Campos, João Carlos & Arenas-Castro, Salvador & Barbosa, A.Márcia, 2023. "A curated list of R packages for ecological niche modelling," Ecological Modelling, Elsevier, vol. 476(C).
    19. Kim, Jung-Hun & Oh, Jeong-Ik & Tsang, Yiu Fai & Park, Young-Kwon & Lee, Jechan & Kwon, Eilhann E., 2020. "CO2-assisted catalytic pyrolysis of digestate with steel slag," Energy, Elsevier, vol. 191(C).
    20. Edward Kato & Claudia Ringler & Mahmud Yesuf & Elizabeth Bryan, 2011. "Soil and water conservation technologies: a buffer against production risk in the face of climate change? Insights from the Nile basin in Ethiopia," Agricultural Economics, International Association of Agricultural Economists, vol. 42(5), pages 593-604, September.

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:eee:ecomod:v:297:y:2015:i:c:p:171-179. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Catherine Liu (email available below). General contact details of provider: http://www.journals.elsevier.com/ecological-modelling .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.