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A pioneer validation of a state-space model of vessel trajectories (VMS) with observers’ data

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  • Walker, E.
  • Bez, N.

Abstract

In the context of the expansion of animal tracking and bio-logging, state-space models have been developed with the objective to characterise animals’ trajectories and to understand the factors controlling their behaviour. In the fisheries community, the electronic tagging of vessels commonly designated by Vessel Monitoring Systems (VMS) is developing and provides a new insight for the understanding, the analysis and the modelling of the trajectories of vessels and their prospecting behaviour. VMS data are thus a clue for the proper definition of fishing effort which remains a fundamental parameter of tuna stock assessments. In this context, we used the VMS (recording of hourly positions) of the French tropical tuna purse-seiners operating in the Indian Ocean to characterise three types of movement (states) on the VMS trajectories (stillness, tracking, and cruising). Based on empirical evidences, and on the regular frequency of VMS acquisition, this was achieved by the development of a Bayesian Hidden Markov model for the speeds and turning angles derived from the hourly steps of the trajectories. In a second phase, states were related to activities disentangling stillness into fishing or stop at sea. Finally the quality of the model performances was rigorously quantified thanks to observers’ data. Confronting model prediction and true activities allowed estimating that 10% of the hourly steps were misclassified. The assumptions and model’ choices are discussed, highlighting the fact that VMS data and observers’ data having different time resolutions, the effective use of validating data was troublesome. However, without validation, these analyses remain speculative. The validation part of this work represents an important step for the operational use of state-space models in ecology in the broad sense (predators’ tracking data, e.g. birds or mammals trajectories).

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  • Walker, E. & Bez, N., 2010. "A pioneer validation of a state-space model of vessel trajectories (VMS) with observers’ data," Ecological Modelling, Elsevier, vol. 221(17), pages 2008-2017.
  • Handle: RePEc:eee:ecomod:v:221:y:2010:i:17:p:2008-2017
    DOI: 10.1016/j.ecolmodel.2010.05.007
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    References listed on IDEAS

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    1. Yann Tremblay & Patrick W Robinson & Daniel P Costa, 2009. "A Parsimonious Approach to Modeling Animal Movement Data," PLOS ONE, Public Library of Science, vol. 4(3), pages 1-11, March.
    2. Gimenez, Olivier & Rossi, Vivien & Choquet, Rémi & Dehais, Camille & Doris, Blaise & Varella, Hubert & Vila, Jean-Pierre & Pradel, Roger, 2007. "State-space modelling of data on marked individuals," Ecological Modelling, Elsevier, vol. 206(3), pages 431-438.
    3. Vermard, Youen & Rivot, Etienne & Mahévas, Stéphanie & Marchal, Paul & Gascuel, Didier, 2010. "Identifying fishing trip behaviour and estimating fishing effort from VMS data using Bayesian Hidden Markov Models," Ecological Modelling, Elsevier, vol. 221(15), pages 1757-1769.
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    Cited by:

    1. Erico N de Souza & Kristina Boerder & Stan Matwin & Boris Worm, 2016. "Improving Fishing Pattern Detection from Satellite AIS Using Data Mining and Machine Learning," PLOS ONE, Public Library of Science, vol. 11(7), pages 1-20, July.
    2. Liu, Yuedan & Lee, Sang-Hee & Chon, Tae-Soo, 2011. "Analysis of behavioral changes of zebrafish (Danio rerio) in response to formaldehyde using Self-organizing map and a hidden Markov model," Ecological Modelling, Elsevier, vol. 222(14), pages 2191-2201.
    3. Woillez, Mathieu & Fablet, Ronan & Ngo, Tran-Thanh & Lalire, Maxime & Lazure, Pascal & de Pontual, Hélène, 2016. "A HMM-based model to geolocate pelagic fish from high-resolution individual temperature and depth histories: European sea bass as a case study," Ecological Modelling, Elsevier, vol. 321(C), pages 10-22.
    4. Guodong Li & Ying Xiong & Xiaming Zhong & Dade Song & Zhongjie Kang & Dongjia Li & Fan Yang & Xiaorui Wu, 2022. "Characterizing Fishing Behaviors and Intensity of Vessels Based on BeiDou VMS Data: A Case Study of TACs Project for Acetes chinensis in the Yellow Sea," Sustainability, MDPI, vol. 14(13), pages 1-16, June.
    5. Floriane Cardiec & Sophie Bertrand & Matthew J Witt & Kristian Metcalfe & Brendan J Godley & Catherine McClellan & Raul Vilela & Richard J Parnell & François le Loc’h, 2020. "“Too Big To Ignore”: A feasibility analysis of detecting fishing events in Gabonese small-scale fisheries," PLOS ONE, Public Library of Science, vol. 15(6), pages 1-19, June.
    6. Tommaso Russo & Lorenzo D'Andrea & Antonio Parisi & Stefano Cataudella, 2014. "VMSbase: An R-Package for VMS and Logbook Data Management and Analysis in Fisheries Ecology," PLOS ONE, Public Library of Science, vol. 9(6), pages 1-18, June.
    7. Boyd, Charlotte & Punt, André E. & Weimerskirch, Henri & Bertrand, Sophie, 2014. "Movement models provide insights into variation in the foraging effort of central place foragers," Ecological Modelling, Elsevier, vol. 286(C), pages 13-25.

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