IDEAS home Printed from https://ideas.repec.org/a/eee/ecomod/v355y2017icp116-125.html
   My bibliography  Save this article

Accounting for false mortality in telemetry tag applications

Author

Listed:
  • Bird, Tomas
  • Lyon, Jarod
  • Wotherspoon, Simon
  • King, Ruth
  • McCarthy, Michael

Abstract

Deaths of animals in the wild are rarely observed directly, which often limits understanding of survival rates. Telemetry transmitters offer field ecologists the opportunity to observe mortality events in cases as the absence of animal movement. When observations of mortality are based on factors such as the absence of animal movement, live individuals can be mistaken for dead, resulting in biased estimates of survival. Additionally, tag failure or emigration might also influence estimates of survival in telemetry studies. Failing to account for mis-classification, tag failure, and emigration rates can result in overestimates of mortality rates by up two-fold, even when the data are corrected for obviously mistaken entries. We use a multi-state capture–recapture model with a misclassification parameter in estimating both the rate of permanent emigration and/or tag failure and the rate at which individuals are mistakenly identified as dead. We use this method on an annual telemetry survey of three species of native fish in the Murray river, Australia: Murray cod (Maccullochella peelii), trout cod (Maccullochella macquariensis) and golden perch (Macquaria ambigua). Evidence for higher mortality rates in the first year post-implantation occurred for Murray cod and golden perch, which is likely an effect of tagging and/or the transmitter, or transmitters shedding. Using simulations, we confirm that our model approach is robust to a broad range of misclassification and transmitter failure rates. With these simulations we also demonstrate that misclassification models that do not account for emigration will likely be erroneous if live and dead animals have different probabilities of detection. These findings will have a broad interest to ecologists wishing to account for multiple sources of misclassification error in capture-mark-recapture studies, with the caveat that the specifics of the approach are dependent on species, transmitter types and other aspects of experimental design which may or may not be amenable to the misclassification framework.

Suggested Citation

  • Bird, Tomas & Lyon, Jarod & Wotherspoon, Simon & King, Ruth & McCarthy, Michael, 2017. "Accounting for false mortality in telemetry tag applications," Ecological Modelling, Elsevier, vol. 355(C), pages 116-125.
  • Handle: RePEc:eee:ecomod:v:355:y:2017:i:c:p:116-125
    DOI: 10.1016/j.ecolmodel.2017.01.019
    as

    Download full text from publisher

    File URL: http://www.sciencedirect.com/science/article/pii/S0304380017300698
    Download Restriction: Full text for ScienceDirect subscribers only

    File URL: https://libkey.io/10.1016/j.ecolmodel.2017.01.019?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    As the access to this document is restricted, you may want to search for a different version of it.

    References listed on IDEAS

    as
    1. Roger Pradel, 2005. "Multievent: An Extension of Multistate Capture–Recapture Models to Uncertain States," Biometrics, The International Biometric Society, vol. 61(2), pages 442-447, June.
    2. David J. Spiegelhalter & Nicola G. Best & Bradley P. Carlin & Angelika Van Der Linde, 2002. "Bayesian measures of model complexity and fit," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 64(4), pages 583-639, October.
    3. Gimenez, Olivier & Rossi, Vivien & Choquet, Rémi & Dehais, Camille & Doris, Blaise & Varella, Hubert & Vila, Jean-Pierre & Pradel, Roger, 2007. "State-space modelling of data on marked individuals," Ecological Modelling, Elsevier, vol. 206(3), pages 431-438.
    Full references (including those not matched with items on IDEAS)

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Meritxell Genovart & Roger Pradel, 2019. "Transience effect in capture-recapture studies: The importance of its biological meaning," PLOS ONE, Public Library of Science, vol. 14(9), pages 1-13, September.
    2. Gimenez, Olivier & Mansilla, Lorena & Klaich, M. Javier & Coscarella, Mariano A. & Pedraza, Susana N. & Crespo, Enrique A., 2019. "Inferring animal social networks with imperfect detection," Ecological Modelling, Elsevier, vol. 401(C), pages 69-74.
    3. Choquet, Rémi & Garnier, Alexandre & Awuve, Edem & Besnard, Aurélien, 2017. "Transient state estimation using continuous-time processes applied to opportunistic capture–recapture data," Ecological Modelling, Elsevier, vol. 361(C), pages 157-163.
    4. Gimenez, Olivier & Lebreton, Jean-Dominique & Gaillard, Jean-Michel & Choquet, Rémi & Pradel, Roger, 2012. "Estimating demographic parameters using hidden process dynamic models," Theoretical Population Biology, Elsevier, vol. 82(4), pages 307-316.
    5. Buddhavarapu, Prasad & Bansal, Prateek & Prozzi, Jorge A., 2021. "A new spatial count data model with time-varying parameters," Transportation Research Part B: Methodological, Elsevier, vol. 150(C), pages 566-586.
    6. Mumtaz, Haroon & Theodoridis, Konstantinos, 2017. "Common and country specific economic uncertainty," Journal of International Economics, Elsevier, vol. 105(C), pages 205-216.
    7. Christina Leuker & Thorsten Pachur & Ralph Hertwig & Timothy J. Pleskac, 2019. "Do people exploit risk–reward structures to simplify information processing in risky choice?," Journal of the Economic Science Association, Springer;Economic Science Association, vol. 5(1), pages 76-94, August.
    8. Rubio, F.J. & Steel, M.F.J., 2011. "Inference for grouped data with a truncated skew-Laplace distribution," Computational Statistics & Data Analysis, Elsevier, vol. 55(12), pages 3218-3231, December.
    9. Alessandri, Piergiorgio & Mumtaz, Haroon, 2019. "Financial regimes and uncertainty shocks," Journal of Monetary Economics, Elsevier, vol. 101(C), pages 31-46.
    10. Svetlana V. Tishkovskaya & Paul G. Blackwell, 2021. "Bayesian estimation of heterogeneous environments from animal movement data," Environmetrics, John Wiley & Sons, Ltd., vol. 32(6), September.
    11. Oliver, Lauren J. & Morgan, Byron J.T. & Durant, Sarah M. & Pettorelli, Nathalie, 2011. "Individual heterogeneity in recapture probability and survival estimates in cheetah," Ecological Modelling, Elsevier, vol. 222(3), pages 776-784.
    12. Leonardo Oliveira Martins & Hirohisa Kishino, 2010. "Distribution of distances between topologies and its effect on detection of phylogenetic recombination," Annals of the Institute of Statistical Mathematics, Springer;The Institute of Statistical Mathematics, vol. 62(1), pages 145-159, February.
    13. Tamal Ghosh & Malay Ghosh & Jerry J. Maples & Xueying Tang, 2022. "Multivariate Global-Local Priors for Small Area Estimation," Stats, MDPI, vol. 5(3), pages 1-16, July.
    14. Eibich, Peter & Ziebarth, Nicolas, 2014. "Examining the Structure of Spatial Health Effects in Germany Using Hierarchical Bayes Models," EconStor Open Access Articles and Book Chapters, ZBW - Leibniz Information Centre for Economics, vol. 49, pages 305-320.
    15. Wu, Ji & Guo, Mengmeng & Chen, Minghua & Jeon, Bang Nam, 2019. "Market power and risk-taking of banks: Some semiparametric evidence from emerging economies," Emerging Markets Review, Elsevier, vol. 41(C).
    16. repec:jss:jstsof:21:i08 is not listed on IDEAS
    17. Deng, Yaguo & Lopes Moreira Da Veiga, María Helena & Wiper, Michael Peter, 2016. "Efficiency evaluation of Spanish hotel chains," DES - Working Papers. Statistics and Econometrics. WS 23897, Universidad Carlos III de Madrid. Departamento de Estadística.
    18. Cathy W. S. Chen & Sangyeol Lee, 2017. "Bayesian causality test for integer-valued time series models with applications to climate and crime data," Journal of the Royal Statistical Society Series C, Royal Statistical Society, vol. 66(4), pages 797-814, August.
    19. Makoto Chikaraishi & Akimasa Fujiwara & Junyi Zhang & Kay Axhausen, 2011. "Identifying variations and co-variations in discrete choice models," Transportation, Springer, vol. 38(6), pages 993-1016, November.
    20. Galatia Cleanthous & Emilio Porcu & Philip White, 2021. "Regularity and approximation of Gaussian random fields evolving temporally over compact two-point homogeneous spaces," TEST: An Official Journal of the Spanish Society of Statistics and Operations Research, Springer;Sociedad de Estadística e Investigación Operativa, vol. 30(4), pages 836-860, December.
    21. Baños-Pino, José F. & Boto-García, David & Zapico, Emma, 2021. "Persistence and dynamics in the efficiency of toll motorways: The Spanish case," Efficiency Series Papers 2021/03, University of Oviedo, Department of Economics, Oviedo Efficiency Group (OEG).

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:eee:ecomod:v:355:y:2017:i:c:p:116-125. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Catherine Liu (email available below). General contact details of provider: http://www.journals.elsevier.com/ecological-modelling .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.