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Parameter sensitivity study of the NEMURO lower trophic level marine ecosystem model

Author

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  • Yoshie, Naoki
  • Yamanaka, Yasuhiro
  • Rose, Kenneth A.
  • Eslinger, David L.
  • Ware, Daniel M.
  • Kishi, Michio J.

Abstract

We investigated the parameter sensitivity of the NEMURO ecosystem model calibrated to field at two typical Stations (A7 and P) in the subarctic North Pacific. The NEMURO model follows various forms of nitrogen and silicon, and the daily biomasses of two phytoplankton and three zooplankton groups for multiple years. Previously calibrated versions to data at two stations provided the basis for comparing parameter sensitivities under different environmental and biological conditions. Four sensitivity analysis experiments were performed involving 72 parameters: 3 experiments used Monte Carlo methods and 1 experiment used a 1-parameter-at-a-time approach. Normalized sensitivities and correlation were used as sensitivity measures for comparison among the four experiments. Monte Carlo and one-parameter-at-a-time methods that used relatively small variations in parameter values (less than or equal to ±10%) yielded very similar rankings of the top five parameters. Parameter rankings from the Monte Carlo analysis that used relatively large variation in parameters (−50% to +100%) differed slightly from the rankings obtained with the small variations. Additional examination of the ±10% results showed that parameters deemed important differed among prognostic variables and differed between Stations A7 and P. For example, annual small phytoplankton biomass was most sensitive to the maximum grazing rate of small zooplankton at both stations, while large phytoplankton biomass was most sensitive to its own maximum photosynthetic rate parameter. While at Station A7 large phytoplankton was sensitive to zooplankton parameters, at Station P it was more sensitive to phytoplankton parameters. A few of certain phytoplankton parameters were consistently important in all sensitivity experiments. Despite sometimes complex relationships between prognostic variables and parameters, our analyses showed that the NEMURO model was generally well-behaved and was robust to parameter variation and to the method used for the sensitivity analysis. Extensions of our analysis could involve computing the sensitivity measure over time through the year, and the use other types of prognostic variables than biomass such as the timing of the phytoplankton bloom. Sensitivity analyses, such as those performed here, are useful tools for applying the NEMURO to other locations and for helping to interpret and diagnose existing NEMURO applications.

Suggested Citation

  • Yoshie, Naoki & Yamanaka, Yasuhiro & Rose, Kenneth A. & Eslinger, David L. & Ware, Daniel M. & Kishi, Michio J., 2007. "Parameter sensitivity study of the NEMURO lower trophic level marine ecosystem model," Ecological Modelling, Elsevier, vol. 202(1), pages 26-37.
  • Handle: RePEc:eee:ecomod:v:202:y:2007:i:1:p:26-37
    DOI: 10.1016/j.ecolmodel.2006.07.043
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    1. Fujii, Masahiko & Yamanaka, Yasuhiro & Nojiri, Yukihiro & Kishi, Michio J. & Chai, Fei, 2007. "Comparison of seasonal characteristics in biogeochemistry among the subarctic North Pacific stations described with a NEMURO-based marine ecosystem model," Ecological Modelling, Elsevier, vol. 202(1), pages 52-67.
    2. Kishi, Michio J. & Kashiwai, Makoto & Ware, Daniel M. & Megrey, Bernard A. & Eslinger, David L. & Werner, Francisco E. & Noguchi-Aita, Maki & Azumaya, Tomonori & Fujii, Masahiko & Hashimoto, Shinji & , 2007. "NEMURO—a lower trophic level model for the North Pacific marine ecosystem," Ecological Modelling, Elsevier, vol. 202(1), pages 12-25.
    3. Hashioka, Taketo & Yamanaka, Yasuhiro, 2007. "Seasonal and regional variations of phytoplankton groups by top–down and bottom–up controls obtained by a 3D ecosystem model," Ecological Modelling, Elsevier, vol. 202(1), pages 68-80.
    4. Megrey, Bernard A. & Rose, Kenneth A. & Klumb, Robert A. & Hay, Douglas E. & Werner, Francisco E. & Eslinger, David L. & Smith, S. Lan, 2007. "A bioenergetics-based population dynamics model of Pacific herring (Clupea harengus pallasi) coupled to a lower trophic level nutrient–phytoplankton–zooplankton model: Description, calibration, and se," Ecological Modelling, Elsevier, vol. 202(1), pages 144-164.
    5. Hashioka, Taketo & Yamanaka, Yasuhiro, 2007. "Ecosystem change in the western North Pacific associated with global warming using 3D-NEMURO," Ecological Modelling, Elsevier, vol. 202(1), pages 95-104.
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    2. Ruzicka, James J. & Wainwright, Thomas C. & Peterson, William T., 2011. "A simple plankton model for the Oregon upwelling ecosystem: Sensitivity and validation against time-series ocean data," Ecological Modelling, Elsevier, vol. 222(6), pages 1222-1235.
    3. Salacinska, K. & El Serafy, G.Y. & Los, F.J. & Blauw, A., 2010. "Sensitivity analysis of the two dimensional application of the Generic Ecological Model (GEM) to algal bloom prediction in the North Sea," Ecological Modelling, Elsevier, vol. 221(2), pages 178-190.
    4. Miho Ishizu & Yasumasa Miyazawa & Tomohiko Tsunoda & Xinyu Guo, 2019. "Development of a Biogeochemical and Carbon Model Related to Ocean Acidification Indices with an Operational Ocean Model Product in the North Western Pacific," Sustainability, MDPI, vol. 11(9), pages 1-28, May.
    5. Kishi, Michio J. & Kashiwai, Makoto & Ware, Daniel M. & Megrey, Bernard A. & Eslinger, David L. & Werner, Francisco E. & Noguchi-Aita, Maki & Azumaya, Tomonori & Fujii, Masahiko & Hashimoto, Shinji & , 2007. "NEMURO—a lower trophic level model for the North Pacific marine ecosystem," Ecological Modelling, Elsevier, vol. 202(1), pages 12-25.
    6. Werner, Francisco E. & Ito, Shin-Ichi & Megrey, Bernard A. & Kishi, Michio J., 2007. "Synthesis of the NEMURO model studies and future directions of marine ecosystem modeling," Ecological Modelling, Elsevier, vol. 202(1), pages 211-223.
    7. Kearney, Kelly A. & Stock, Charles & Aydin, Kerim & Sarmiento, Jorge L., 2012. "Coupling planktonic ecosystem and fisheries food web models for a pelagic ecosystem: Description and validation for the subarctic Pacific," Ecological Modelling, Elsevier, vol. 237, pages 43-62.
    8. Megrey, Bernard A. & Rose, Kenneth A. & Klumb, Robert A. & Hay, Douglas E. & Werner, Francisco E. & Eslinger, David L. & Smith, S. Lan, 2007. "A bioenergetics-based population dynamics model of Pacific herring (Clupea harengus pallasi) coupled to a lower trophic level nutrient–phytoplankton–zooplankton model: Description, calibration, and se," Ecological Modelling, Elsevier, vol. 202(1), pages 144-164.
    9. Fujii, Masahiko & Yamanaka, Yasuhiro & Nojiri, Yukihiro & Kishi, Michio J. & Chai, Fei, 2007. "Comparison of seasonal characteristics in biogeochemistry among the subarctic North Pacific stations described with a NEMURO-based marine ecosystem model," Ecological Modelling, Elsevier, vol. 202(1), pages 52-67.
    10. Komatsu, Kosei & Matsukawa, Yasuo & Nakata, Kaoru & Ichikawa, Tadafumi & Sasaki, Katsuyuki, 2007. "Effects of advective processes on planktonic distributions in the Kuroshio region using a 3-D lower trophic model and a data assimilative OGCM," Ecological Modelling, Elsevier, vol. 202(1), pages 105-119.

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