Shrinkage-based regularization tests for high-dimensional data with application to gene set analysis
Author
Abstract
Suggested Citation
Download full text from publisher
As the access to this document is restricted, you may want to search for a different version of it.
References listed on IDEAS
- Ledoit, Olivier & Wolf, Michael, 2004.
"A well-conditioned estimator for large-dimensional covariance matrices,"
Journal of Multivariate Analysis, Elsevier, vol. 88(2), pages 365-411, February.
- Ledoit, Olivier & Wolf, Michael, 2000. "A well conditioned estimator for large dimensional covariance matrices," DES - Working Papers. Statistics and Econometrics. WS 10087, Universidad Carlos III de Madrid. Departamento de EstadÃstica.
- Xu, Ping & Brock, Guy N. & Parrish, Rudolph S., 2009. "Modified linear discriminant analysis approaches for classification of high-dimensional microarray data," Computational Statistics & Data Analysis, Elsevier, vol. 53(5), pages 1674-1687, March.
- Schäfer Juliane & Strimmer Korbinian, 2005. "A Shrinkage Approach to Large-Scale Covariance Matrix Estimation and Implications for Functional Genomics," Statistical Applications in Genetics and Molecular Biology, De Gruyter, vol. 4(1), pages 1-32, November.
- Warton, David I., 2008. "Penalized Normal Likelihood and Ridge Regularization of Correlation and Covariance Matrices," Journal of the American Statistical Association, American Statistical Association, vol. 103, pages 340-349, March.
- Joseph P. Romano & Azeem M. Shaikh & Michael Wolf, 2010.
"Hypothesis Testing in Econometrics,"
Annual Review of Economics, Annual Reviews, vol. 2(1), pages 75-104, September.
- Joseph P. Romano & Azeem M. Shaikh & Michael Wolf, 2009. "Hypothesis testing in econometrics," IEW - Working Papers 444, Institute for Empirical Research in Economics - University of Zurich.
Citations
Citations are extracted by the CitEc Project, subscribe to its RSS feed for this item.
Cited by:
- Zhang, Qiuyan & Wang, Chen & Zhang, Baoxue & Yang, Hu, 2024. "An RIHT statistic for testing the equality of several high-dimensional mean vectors under homoskedasticity," Computational Statistics & Data Analysis, Elsevier, vol. 190(C).
- Zhang, Jin-Ting & Zhu, Tianming, 2022. "A new normal reference test for linear hypothesis testing in high-dimensional heteroscedastic one-way MANOVA," Computational Statistics & Data Analysis, Elsevier, vol. 168(C).
- Shen, Yanfeng & Lin, Zhengyan, 2015. "An adaptive test for the mean vector in large-p-small-n problems," Computational Statistics & Data Analysis, Elsevier, vol. 89(C), pages 25-38.
- Yin Xia, 2017. "Testing and support recovery of multiple high-dimensional covariance matrices with false discovery rate control," TEST: An Official Journal of the Spanish Society of Statistics and Operations Research, Springer;Sociedad de Estadística e Investigación Operativa, vol. 26(4), pages 782-801, December.
- Zhao, Junguang & Xu, Xingzhong, 2016. "A generalized likelihood ratio test for normal mean when p is greater than n," Computational Statistics & Data Analysis, Elsevier, vol. 99(C), pages 91-104.
- Cai, T. Tony & Xia, Yin, 2014. "High-dimensional sparse MANOVA," Journal of Multivariate Analysis, Elsevier, vol. 131(C), pages 174-196.
- Xiao Min & Chen Ting & Huang Kunpeng & Ming Ruixing, 2020. "Optimal Estimation for Power of Variance with Application to Gene-Set Testing," Journal of Systems Science and Information, De Gruyter, vol. 8(6), pages 549-564, December.
- Soneson, Charlotte & Fontes, Magnus, 2014. "Incorporation of gene exchangeabilities improves the reproducibility of gene set rankings," Computational Statistics & Data Analysis, Elsevier, vol. 71(C), pages 588-598.
- Dong, Kai & Pang, Herbert & Tong, Tiejun & Genton, Marc G., 2016. "Shrinkage-based diagonal Hotelling’s tests for high-dimensional small sample size data," Journal of Multivariate Analysis, Elsevier, vol. 143(C), pages 127-142.
- Jin-Ting Zhang & Bu Zhou & Jia Guo, 2022. "Testing high-dimensional mean vector with applications," Statistical Papers, Springer, vol. 63(4), pages 1105-1137, August.
Most related items
These are the items that most often cite the same works as this one and are cited by the same works as this one.- Avagyan, Vahe & Nogales, Francisco J., 2015. "D-trace Precision Matrix Estimation Using Adaptive Lasso Penalties," DES - Working Papers. Statistics and Econometrics. WS 21775, Universidad Carlos III de Madrid. Departamento de EstadÃstica.
- Lam, Clifford, 2020. "High-dimensional covariance matrix estimation," LSE Research Online Documents on Economics 101667, London School of Economics and Political Science, LSE Library.
- Shen, Yanfeng & Lin, Zhengyan, 2015. "An adaptive test for the mean vector in large-p-small-n problems," Computational Statistics & Data Analysis, Elsevier, vol. 89(C), pages 25-38.
- Vahe Avagyan & Andrés M. Alonso & Francisco J. Nogales, 2018. "D-trace estimation of a precision matrix using adaptive Lasso penalties," Advances in Data Analysis and Classification, Springer;German Classification Society - Gesellschaft für Klassifikation (GfKl);Japanese Classification Society (JCS);Classification and Data Analysis Group of the Italian Statistical Society (CLADAG);International Federation of Classification Societies (IFCS), vol. 12(2), pages 425-447, June.
- Pedro Duarte Silva, A., 2011. "Two-group classification with high-dimensional correlated data: A factor model approach," Computational Statistics & Data Analysis, Elsevier, vol. 55(11), pages 2975-2990, November.
- van Wieringen, Wessel N. & Peeters, Carel F.W., 2016. "Ridge estimation of inverse covariance matrices from high-dimensional data," Computational Statistics & Data Analysis, Elsevier, vol. 103(C), pages 284-303.
- Hannart, Alexis & Naveau, Philippe, 2014. "Estimating high dimensional covariance matrices: A new look at the Gaussian conjugate framework," Journal of Multivariate Analysis, Elsevier, vol. 131(C), pages 149-162.
- Christian Bongiorno, 2020. "Bootstraps Regularize Singular Correlation Matrices," Working Papers hal-02536278, HAL.
- van Wieringen, Wessel N. & Stam, Koen A. & Peeters, Carel F.W. & van de Wiel, Mark A., 2020. "Updating of the Gaussian graphical model through targeted penalized estimation," Journal of Multivariate Analysis, Elsevier, vol. 178(C).
- Zongliang Hu & Zhishui Hu & Kai Dong & Tiejun Tong & Yuedong Wang, 2021. "A shrinkage approach to joint estimation of multiple covariance matrices," Metrika: International Journal for Theoretical and Applied Statistics, Springer, vol. 84(3), pages 339-374, April.
- Tenenhaus, Arthur & Philippe, Cathy & Frouin, Vincent, 2015. "Kernel Generalized Canonical Correlation Analysis," Computational Statistics & Data Analysis, Elsevier, vol. 90(C), pages 114-131.
- Ledoit, Olivier & Wolf, Michael, 2017.
"Numerical implementation of the QuEST function,"
Computational Statistics & Data Analysis, Elsevier, vol. 115(C), pages 199-223.
- Olivier Ledoit & Michael Wolf, 2016. "Numerical implementation of the QuEST function," ECON - Working Papers 215, Department of Economics - University of Zurich, revised Jan 2017.
- Sumanjay Dutta & Shashi Jain, 2023. "Precision versus Shrinkage: A Comparative Analysis of Covariance Estimation Methods for Portfolio Allocation," Papers 2305.11298, arXiv.org.
- Brett Naul & Bala Rajaratnam & Dario Vincenzi, 2016. "The role of the isotonizing algorithm in Stein’s covariance matrix estimator," Computational Statistics, Springer, vol. 31(4), pages 1453-1476, December.
- Gautam Sabnis & Debdeep Pati & Anirban Bhattacharya, 2019. "Compressed Covariance Estimation with Automated Dimension Learning," Sankhya A: The Indian Journal of Statistics, Springer;Indian Statistical Institute, vol. 81(2), pages 466-481, December.
- Couillet, Romain & McKay, Matthew, 2014. "Large dimensional analysis and optimization of robust shrinkage covariance matrix estimators," Journal of Multivariate Analysis, Elsevier, vol. 131(C), pages 99-120.
- Daniele Girolimetto & George Athanasopoulos & Tommaso Di Fonzo & Rob J Hyndman, 2023. "Cross-temporal Probabilistic Forecast Reconciliation," Monash Econometrics and Business Statistics Working Papers 6/23, Monash University, Department of Econometrics and Business Statistics.
- Huang, Na & Fryzlewicz, Piotr, 2018. "NOVELIST estimator of large correlation and covariance matrices and their inverses," LSE Research Online Documents on Economics 89055, London School of Economics and Political Science, LSE Library.
- Michel Tenenhaus & Arthur Tenenhaus & Patrick J. F. Groenen, 2017. "Regularized Generalized Canonical Correlation Analysis: A Framework for Sequential Multiblock Component Methods," Psychometrika, Springer;The Psychometric Society, vol. 82(3), pages 737-777, September.
- Leprince, Julien & Madsen, Henrik & Møller, Jan Kloppenborg & Zeiler, Wim, 2023. "Hierarchical learning, forecasting coherent spatio-temporal individual and aggregated building loads," Applied Energy, Elsevier, vol. 348(C).
More about this item
Keywords
Feature selection Gene set analysis High dimensionality MANOVA Power Regularization;Statistics
Access and download statisticsCorrections
All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:eee:csdana:v:55:y:2011:i:7:p:2221-2233. See general information about how to correct material in RePEc.
If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.
If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .
If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.
For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Catherine Liu (email available below). General contact details of provider: http://www.elsevier.com/locate/csda .
Please note that corrections may take a couple of weeks to filter through the various RePEc services.