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Statistical inference for noisy nonlinear ecological dynamic systems

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Cited by:

  1. Henri Pesonen & Umberto Simola & Alvaro Köhn‐Luque & Henri Vuollekoski & Xiaoran Lai & Arnoldo Frigessi & Samuel Kaski & David T. Frazier & Worapree Maneesoonthorn & Gael M. Martin & Jukka Corander, 2023. "ABC of the future," International Statistical Review, International Statistical Institute, vol. 91(2), pages 243-268, August.
  2. Oliver J Maclaren & Aimée Parker & Carmen Pin & Simon R Carding & Alastair J M Watson & Alexander G Fletcher & Helen M Byrne & Philip K Maini, 2017. "A hierarchical Bayesian model for understanding the spatiotemporal dynamics of the intestinal epithelium," PLOS Computational Biology, Public Library of Science, vol. 13(7), pages 1-23, July.
  3. Nguyen, Dao, 2016. "Another look at Bayes map iterated filtering," Statistics & Probability Letters, Elsevier, vol. 118(C), pages 32-36.
  4. Grazzini, Jakob & Richiardi, Matteo G. & Tsionas, Mike, 2017. "Bayesian estimation of agent-based models," Journal of Economic Dynamics and Control, Elsevier, vol. 77(C), pages 26-47.
  5. Anthony Ebert & Kerrie Mengersen & Fabrizio Ruggeri & Paul Wu, 2021. "Curve Registration of Functional Data for Approximate Bayesian Computation," Stats, MDPI, vol. 4(3), pages 1-14, September.
  6. Wanchuang Zhu & Yanan Fan, 2023. "A synthetic likelihood approach for intractable markov random fields," Computational Statistics, Springer, vol. 38(2), pages 749-777, June.
  7. Ramis Khabibullin & Sergei Seleznev, 2022. "Fast Estimation of Bayesian State Space Models Using Amortized Simulation-Based Inference," Bank of Russia Working Paper Series wps104, Bank of Russia.
  8. Ong, Victor M.-H. & Nott, David J. & Tran, Minh-Ngoc & Sisson, Scott A. & Drovandi, Christopher C., 2018. "Likelihood-free inference in high dimensions with synthetic likelihood," Computational Statistics & Data Analysis, Elsevier, vol. 128(C), pages 271-291.
  9. Farmer, J. Doyne & Dyer, Joel & Cannon, Patrick & Schmon, Sebastian, 2022. "Black-box Bayesian inference for economic agent-based models," INET Oxford Working Papers 2022-05, Institute for New Economic Thinking at the Oxford Martin School, University of Oxford.
  10. Jonathan U Harrison & Ruth E Baker, 2020. "An automatic adaptive method to combine summary statistics in approximate Bayesian computation," PLOS ONE, Public Library of Science, vol. 15(8), pages 1-21, August.
  11. Gael M. Martin & David T. Frazier & Christian P. Robert, 2020. "Computing Bayes: Bayesian Computation from 1763 to the 21st Century," Monash Econometrics and Business Statistics Working Papers 14/20, Monash University, Department of Econometrics and Business Statistics.
  12. Dyer, Joel & Cannon, Patrick & Farmer, J. Doyne & Schmon, Sebastian M., 2024. "Black-box Bayesian inference for agent-based models," Journal of Economic Dynamics and Control, Elsevier, vol. 161(C).
  13. Golchi, Shirin & Campbell, David A., 2016. "Sequentially Constrained Monte Carlo," Computational Statistics & Data Analysis, Elsevier, vol. 97(C), pages 98-113.
  14. Evrendilek, F. & Karakaya, N., 2014. "Regression model-based predictions of diel, diurnal and nocturnal dissolved oxygen dynamics after wavelet denoising of noisy time series," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 404(C), pages 8-15.
  15. Daniel Durstewitz, 2017. "A state space approach for piecewise-linear recurrent neural networks for identifying computational dynamics from neural measurements," PLOS Computational Biology, Public Library of Science, vol. 13(6), pages 1-33, June.
  16. Georgia Koppe & Hazem Toutounji & Peter Kirsch & Stefanie Lis & Daniel Durstewitz, 2019. "Identifying nonlinear dynamical systems via generative recurrent neural networks with applications to fMRI," PLOS Computational Biology, Public Library of Science, vol. 15(8), pages 1-35, August.
  17. Lili Zhuang & Noel Cressie, 2014. "Bayesian hierarchical statistical SIRS models," Statistical Methods & Applications, Springer;Società Italiana di Statistica, vol. 23(4), pages 601-646, November.
  18. Forneron, Jean-Jacques & Ng, Serena, 2018. "The ABC of simulation estimation with auxiliary statistics," Journal of Econometrics, Elsevier, vol. 205(1), pages 112-139.
  19. Barde, Sylvain, 2024. "Bayesian estimation of large-scale simulation models with Gaussian process regression surrogates," Computational Statistics & Data Analysis, Elsevier, vol. 196(C).
  20. Aushev, Alexander & Pesonen, Henri & Heinonen, Markus & Corander, Jukka & Kaski, Samuel, 2022. "Likelihood-free inference with deep Gaussian processes," Computational Statistics & Data Analysis, Elsevier, vol. 174(C).
  21. Priddle, Jacob W. & Drovandi, Christopher, 2023. "Transformations in semi-parametric Bayesian synthetic likelihood," Computational Statistics & Data Analysis, Elsevier, vol. 187(C).
  22. George Karabatsos, 2018. "On Bayesian Testing of Additive Conjoint Measurement Axioms Using Synthetic Likelihood," Psychometrika, Springer;The Psychometric Society, vol. 83(2), pages 321-332, June.
  23. Niyousha Hosseinichimeh & Hazhir Rahmandad & Mohammad S. Jalali & Andrea K. Wittenborn, 2016. "Estimating the parameters of system dynamics models using indirect inference," System Dynamics Review, System Dynamics Society, vol. 32(2), pages 154-178, April.
  24. Jean-Jacques Forneron, 2019. "A Scrambled Method of Moments," Papers 1911.09128, arXiv.org.
  25. Wiqvist, Samuel & Golightly, Andrew & McLean, Ashleigh T. & Picchini, Umberto, 2021. "Efficient inference for stochastic differential equation mixed-effects models using correlated particle pseudo-marginal algorithms," Computational Statistics & Data Analysis, Elsevier, vol. 157(C).
  26. King, Aaron A. & Lin, Qianying & Ionides, Edward L., 2022. "Markov genealogy processes," Theoretical Population Biology, Elsevier, vol. 143(C), pages 77-91.
  27. Dehideniya, Mahasen B. & Drovandi, Christopher C. & McGree, James M., 2018. "Optimal Bayesian design for discriminating between models with intractable likelihoods in epidemiology," Computational Statistics & Data Analysis, Elsevier, vol. 124(C), pages 277-297.
  28. Gael M. Martin & David T. Frazier & Christian P. Robert, 2021. "Approximating Bayes in the 21st Century," Monash Econometrics and Business Statistics Working Papers 24/21, Monash University, Department of Econometrics and Business Statistics.
  29. Barraquand, Frédéric & Gimenez, Olivier, 2019. "Integrating multiple data sources to fit matrix population models for interacting species," Ecological Modelling, Elsevier, vol. 411(C).
  30. Delli Gatti,Domenico & Fagiolo,Giorgio & Gallegati,Mauro & Richiardi,Matteo & Russo,Alberto (ed.), 2018. "Agent-Based Models in Economics," Cambridge Books, Cambridge University Press, number 9781108400046, November.
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