Combining assumptions and graphical network into gene expression data analysis
Author
Abstract
Suggested Citation
DOI: 10.1186/s40488-021-00126-z
Download full text from publisher
References listed on IDEAS
- Julian Besag & Jeremy York & Annie Mollié, 1991. "Bayesian image restoration, with two applications in spatial statistics," Annals of the Institute of Statistical Mathematics, Springer;The Institute of Statistical Mathematics, vol. 43(1), pages 1-20, March.
- Lee, Duncan, 2013. "CARBayes: An R Package for Bayesian Spatial Modeling with Conditional Autoregressive Priors," Journal of Statistical Software, Foundation for Open Access Statistics, vol. 55(i13).
- Pounds, Stan & Rai, Shesh N., 2009. "Assumption adequacy averaging as a concept for developing more robust methods for differential gene expression analysis," Computational Statistics & Data Analysis, Elsevier, vol. 53(5), pages 1604-1612, March.
- J. Besag & D. Higdon, 1999. "Bayesian analysis of agricultural field experiments," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 61(4), pages 691-746.
Most related items
These are the items that most often cite the same works as this one and are cited by the same works as this one.- Wiki, Jesse & Kingham, Simon & Campbell, Malcolm, 2021. "A geospatial analysis of Type 2 Diabetes Mellitus and the food environment in urban New Zealand," Social Science & Medicine, Elsevier, vol. 288(C).
- Ferreira, Marco A.R. & Porter, Erica M. & Franck, Christopher T., 2021. "Fast and scalable computations for Gaussian hierarchical models with intrinsic conditional autoregressive spatial random effects," Computational Statistics & Data Analysis, Elsevier, vol. 162(C).
- Håvard Rue & Ingelin Steinsland & Sveinung Erland, 2004. "Approximating hidden Gaussian Markov random fields," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 66(4), pages 877-892, November.
- Gamerman, Dani & Moreira, Ajax R. B. & Rue, Havard, 2003. "Space-varying regression models: specifications and simulation," Computational Statistics & Data Analysis, Elsevier, vol. 42(3), pages 513-533, March.
- Demetris Lamnisos & Nicos Middleton & Nikoletta Kyprianou & Michael A. Talias, 2019. "Geodemographic Area Classification and Association with Mortality: An Ecological Study of Small Areas of Cyprus," IJERPH, MDPI, vol. 16(16), pages 1-13, August.
- Mabel Morales-Otero & Vicente Núñez-Antón, 2021. "Comparing Bayesian Spatial Conditional Overdispersion and the Besag–York–Mollié Models: Application to Infant Mortality Rates," Mathematics, MDPI, vol. 9(3), pages 1-33, January.
- Mary Kathryn Cowles & Stephen Bonett & Michael Seedorff, 2018. "Independent sampling for Bayesian normal conditional autoregressive models with OpenCL acceleration," Computational Statistics, Springer, vol. 33(1), pages 159-177, March.
- Meen Chel Jung & Jaewoo Park & Sunghwan Kim, 2019. "Spatial Relationships between Urban Structures and Air Pollution in Korea," Sustainability, MDPI, vol. 11(2), pages 1-17, January.
- Duncan Lee & Richard Mitchell, 2013. "Locally adaptive spatial smoothing using conditional auto-regressive models," Journal of the Royal Statistical Society Series C, Royal Statistical Society, vol. 62(4), pages 593-608, August.
- KWON, Heeeun & HWANG, Beom Seuk, 2023. "Do Spatial Characteristics Affect Housing Prices in Korea? : Evidence from Bayesian Spatial Models," Hitotsubashi Journal of Economics, Hitotsubashi University, vol. 64(2), pages 109-124, December.
- James S. Hodges & Bradley P. Carlin & Qiao Fan, 2003. "On the Precision of the Conditionally Autoregressive Prior in Spatial Models," Biometrics, The International Biometric Society, vol. 59(2), pages 317-322, June.
- Konstantinos Giannakou & Demetris Lamnisos, 2022. "Small-Area Geographic and Socioeconomic Inequalities in Colorectal Cancer in Cyprus," IJERPH, MDPI, vol. 20(1), pages 1-15, December.
- Dongkwan Lee & Jean-Michel Guldmann & Choongik Choi, 2019. "Factors Contributing to the Relationship between Driving Mileage and Crash Frequency of Older Drivers," Sustainability, MDPI, vol. 11(23), pages 1-13, November.
- Duncan Lee & Chris Robertson & Colin Ramsay & Kate Pyper, 2020. "Quantifying the impact of the modifiable areal unit problem when estimating the health effects of air pollution," Environmetrics, John Wiley & Sons, Ltd., vol. 31(8), December.
- Nikoline N. Knudsen & Jörg Schullehner & Birgitte Hansen & Lisbeth F. Jørgensen & Søren M. Kristiansen & Denitza D. Voutchkova & Thomas A. Gerds & Per K. Andersen & Kristine Bihrmann & Morten Grønbæk , 2017. "Lithium in Drinking Water and Incidence of Suicide: A Nationwide Individual-Level Cohort Study with 22 Years of Follow-Up," IJERPH, MDPI, vol. 14(6), pages 1-13, June.
- Katie Wilson & Jon Wakefield, 2022. "A probabilistic model for analyzing summary birth history data," Demographic Research, Max Planck Institute for Demographic Research, Rostock, Germany, vol. 47(11), pages 291-344.
- Pounds Stanley B. & Gao Cuilan L. & Zhang Hui, 2012. "Empirical Bayesian Selection of Hypothesis Testing Procedures for Analysis of Sequence Count Expression Data," Statistical Applications in Genetics and Molecular Biology, De Gruyter, vol. 11(5), pages 1-32, October.
- Eibich, Peter & Ziebarth, Nicolas, 2014.
"Examining the Structure of Spatial Health Effects in Germany Using Hierarchical Bayes Models,"
EconStor Open Access Articles and Book Chapters, ZBW - Leibniz Information Centre for Economics, vol. 49, pages 305-320.
- Eibich, Peter & Ziebarth, Nicolas R., 2014. "Examining the structure of spatial health effects in Germany using Hierarchical Bayes Models," Regional Science and Urban Economics, Elsevier, vol. 49(C), pages 305-320.
- Eibich, Peter & Ziebarth, Nicolas, 2013. "Examining the Structure of Spatial Health Effects using Hierarchical Bayes Models," VfS Annual Conference 2013 (Duesseldorf): Competition Policy and Regulation in a Global Economic Order 79844, Verein für Socialpolitik / German Economic Association.
- Peter Eibich & Nicolas R. Ziebarth, 2013. "Examining the Structure of Spatial Health Effects in Germany Using Hierarchical Bayes Models," SOEPpapers on Multidisciplinary Panel Data Research 620, DIW Berlin, The German Socio-Economic Panel (SOEP).
- Shreosi Sanyal & Thierry Rochereau & Cara Nichole Maesano & Laure Com-Ruelle & Isabella Annesi-Maesano, 2018. "Long-Term Effect of Outdoor Air Pollution on Mortality and Morbidity: A 12-Year Follow-Up Study for Metropolitan France," IJERPH, MDPI, vol. 15(11), pages 1-8, November.
- Mayer Alvo & Jingrui Mu, 2023. "COVID-19 Data Analysis Using Bayesian Models and Nonparametric Geostatistical Models," Mathematics, MDPI, vol. 11(6), pages 1-13, March.
More about this item
Keywords
Bayesian spatial network; Gene expression; Multiple testings;All these keywords.
Statistics
Access and download statisticsCorrections
All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:spr:jstada:v:8:y:2021:i:1:d:10.1186_s40488-021-00126-z. See general information about how to correct material in RePEc.
If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.
If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .
If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.
For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Sonal Shukla or Springer Nature Abstracting and Indexing (email available below). General contact details of provider: http://www.springer.com .
Please note that corrections may take a couple of weeks to filter through the various RePEc services.