IDEAS home Printed from https://ideas.repec.org/a/spr/compst/v39y2024i5d10.1007_s00180-023-01387-9.html
   My bibliography  Save this article

Row mixture-based clustering with covariates for ordinal responses

Author

Listed:
  • Kemmawadee Preedalikit

    (University of Phayao)

  • Daniel Fernández

    (Universitat Politècnica de Catalunya · BarcelonaTech (UPC)
    Institute of Mathematics of UPC - BarcelonaTech (IMTech))

  • Ivy Liu

    (Victoria University of Wellington)

  • Louise McMillan

    (Victoria University of Wellington)

  • Marta Nai Ruscone

    (University of Genoa)

  • Roy Costilla

    (AgResearch Limited, Ruakura Research Centre)

Abstract

Existing methods can perform likelihood-based clustering on a multivariate data matrix of ordinal data, using finite mixtures to cluster the rows (observations) of the matrix. These models can incorporate the main effects of individual rows and columns, as well as cluster effects, to model the matrix of responses. However, many real-world applications also include available covariates, which provide insights into the main characteristics of the clusters and determine clustering structures based on both the individuals’ similar patterns of responses and the effects of the covariates on the individuals' responses. In our research we have extended the mixture-based models to include covariates and test what effect this has on the resulting clustering structures. We focus on clustering the rows of the data matrix, using the proportional odds cumulative logit model for ordinal data. We fit the models using the Expectation-Maximization algorithm and assess performance using a simulation study. We also illustrate an application of the models to the well-known arthritis clinical trial data set.

Suggested Citation

  • Kemmawadee Preedalikit & Daniel Fernández & Ivy Liu & Louise McMillan & Marta Nai Ruscone & Roy Costilla, 2024. "Row mixture-based clustering with covariates for ordinal responses," Computational Statistics, Springer, vol. 39(5), pages 2511-2555, July.
  • Handle: RePEc:spr:compst:v:39:y:2024:i:5:d:10.1007_s00180-023-01387-9
    DOI: 10.1007/s00180-023-01387-9
    as

    Download full text from publisher

    File URL: http://link.springer.com/10.1007/s00180-023-01387-9
    File Function: Abstract
    Download Restriction: Access to the full text of the articles in this series is restricted.

    File URL: https://libkey.io/10.1007/s00180-023-01387-9?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    As the access to this document is restricted, you may want to search for a different version of it.

    References listed on IDEAS

    as
    1. Fernández, D. & Arnold, R. & Pledger, S., 2016. "Mixture-based clustering for the ordered stereotype model," Computational Statistics & Data Analysis, Elsevier, vol. 93(C), pages 46-75.
    2. Rocci, Roberto & Vichi, Maurizio, 2008. "Two-mode multi-partitioning," Computational Statistics & Data Analysis, Elsevier, vol. 52(4), pages 1984-2003, January.
    3. Eleni Matechou & Ivy Liu & Daniel Fernández & Miguel Farias & Bergljot Gjelsvik, 2016. "Biclustering Models for Two-Mode Ordinal Data," Psychometrika, Springer;The Psychometric Society, vol. 81(3), pages 611-624, September.
    4. Peter D. Hoff, 2005. "Subset Clustering of Binary Sequences, with an Application to Genomic Abnormality Data," Biometrics, The International Biometric Society, vol. 61(4), pages 1027-1036, December.
    5. Keefe Murphy & Thomas Brendan Murphy, 2020. "Gaussian parsimonious clustering models with covariates and a noise component," Advances in Data Analysis and Classification, Springer;German Classification Society - Gesellschaft für Klassifikation (GfKl);Japanese Classification Society (JCS);Classification and Data Analysis Group of the Italian Statistical Society (CLADAG);International Federation of Classification Societies (IFCS), vol. 14(2), pages 293-325, June.
    6. Pledger, Shirley & Arnold, Richard, 2014. "Multivariate methods using mixtures: Correspondence analysis, scaling and pattern-detection," Computational Statistics & Data Analysis, Elsevier, vol. 71(C), pages 241-261.
    7. Stephen Johnson, 1967. "Hierarchical clustering schemes," Psychometrika, Springer;The Psychometric Society, vol. 32(3), pages 241-254, September.
    8. Stuart R. Lipsitz & Garrett M. Fitzmaurice & Geert Molenberghs, 1996. "Goodness‐Of‐Fit Tests for Ordinal Response Regression Models," Journal of the Royal Statistical Society Series C, Royal Statistical Society, vol. 45(2), pages 175-190, June.
    9. Touloumis, Anestis, 2015. "R Package multgee: A Generalized Estimating Equations Solver for Multinomial Responses," Journal of Statistical Software, Foundation for Open Access Statistics, vol. 64(i08).
    10. Salvatore Ingrassia & Simona Minotti & Giorgio Vittadini, 2012. "Local Statistical Modeling via a Cluster-Weighted Approach with Elliptical Distributions," Journal of Classification, Springer;The Classification Society, vol. 29(3), pages 363-401, October.
    11. Salvatore Ingrassia & Antonio Punzo & Giorgio Vittadini & Simona Minotti, 2015. "Erratum to: The Generalized Linear Mixed Cluster-Weighted Model," Journal of Classification, Springer;The Classification Society, vol. 32(2), pages 327-355, July.
    12. Bohning, Dankmar & Seidel, Wilfried & Alfo, Macro & Garel, Bernard & Patilea, Valentin & Walther, Gunther, 2007. "Advances in Mixture Models," Computational Statistics & Data Analysis, Elsevier, vol. 51(11), pages 5205-5210, July.
    13. Lawrence Hubert & Phipps Arabie, 1985. "Comparing partitions," Journal of Classification, Springer;The Classification Society, vol. 2(1), pages 193-218, December.
    14. Jeffrey Andrews & Paul McNicholas, 2014. "Variable Selection for Clustering and Classification," Journal of Classification, Springer;The Classification Society, vol. 31(2), pages 136-153, July.
    15. Daniel Fernández & Richard Arnold & Shirley Pledger & Ivy Liu & Roy Costilla, 2019. "Finite mixture biclustering of discrete type multivariate data," Advances in Data Analysis and Classification, Springer;German Classification Society - Gesellschaft für Klassifikation (GfKl);Japanese Classification Society (JCS);Classification and Data Analysis Group of the Italian Statistical Society (CLADAG);International Federation of Classification Societies (IFCS), vol. 13(1), pages 117-143, March.
    16. E. Fowlkes & R. Gnanadesikan & J. Kettenring, 1988. "Variable selection in clustering," Journal of Classification, Springer;The Classification Society, vol. 5(2), pages 205-228, September.
    17. Raftery, Adrian E. & Dean, Nema, 2006. "Variable Selection for Model-Based Clustering," Journal of the American Statistical Association, American Statistical Association, vol. 101, pages 168-178, March.
    18. Meila, Marina, 2007. "Comparing clusterings--an information based distance," Journal of Multivariate Analysis, Elsevier, vol. 98(5), pages 873-895, May.
    19. Ranalli, Monia & Rocci, Roberto, 2017. "Mixture models for mixed-type data through a composite likelihood approach," Computational Statistics & Data Analysis, Elsevier, vol. 110(C), pages 87-102.
    Full references (including those not matched with items on IDEAS)

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Daniel Fernández & Richard Arnold & Shirley Pledger & Ivy Liu & Roy Costilla, 2019. "Finite mixture biclustering of discrete type multivariate data," Advances in Data Analysis and Classification, Springer;German Classification Society - Gesellschaft für Klassifikation (GfKl);Japanese Classification Society (JCS);Classification and Data Analysis Group of the Italian Statistical Society (CLADAG);International Federation of Classification Societies (IFCS), vol. 13(1), pages 117-143, March.
    2. Fernández, D. & Arnold, R. & Pledger, S., 2016. "Mixture-based clustering for the ordered stereotype model," Computational Statistics & Data Analysis, Elsevier, vol. 93(C), pages 46-75.
    3. Monia Ranalli & Roberto Rocci, 2024. "Composite likelihood methods for parsimonious model-based clustering of mixed-type data," Advances in Data Analysis and Classification, Springer;German Classification Society - Gesellschaft für Klassifikation (GfKl);Japanese Classification Society (JCS);Classification and Data Analysis Group of the Italian Statistical Society (CLADAG);International Federation of Classification Societies (IFCS), vol. 18(2), pages 381-407, June.
    4. Paul D. McNicholas, 2016. "Model-Based Clustering," Journal of Classification, Springer;The Classification Society, vol. 33(3), pages 331-373, October.
    5. Michael P. B. Gallaugher & Paul D. McNicholas, 2019. "On Fractionally-Supervised Classification: Weight Selection and Extension to the Multivariate t-Distribution," Journal of Classification, Springer;The Classification Society, vol. 36(2), pages 232-265, July.
    6. Utkarsh J. Dang & Antonio Punzo & Paul D. McNicholas & Salvatore Ingrassia & Ryan P. Browne, 2017. "Multivariate Response and Parsimony for Gaussian Cluster-Weighted Models," Journal of Classification, Springer;The Classification Society, vol. 34(1), pages 4-34, April.
    7. Tatjana Miljkovic & Daniel Fernández, 2018. "On Two Mixture-Based Clustering Approaches Used in Modeling an Insurance Portfolio," Risks, MDPI, vol. 6(2), pages 1-18, May.
    8. Matthieu Marbac & Mohammed Sedki & Tienne Patin, 2020. "Variable Selection for Mixed Data Clustering: Application in Human Population Genomics," Journal of Classification, Springer;The Classification Society, vol. 37(1), pages 124-142, April.
    9. Daniel Fernández & Radim J. Sram & Miroslav Dostal & Anna Pastorkova & Hans Gmuender & Hyunok Choi, 2018. "Modeling Unobserved Heterogeneity in Susceptibility to Ambient Benzo[ a ]pyrene Concentration among Children with Allergic Asthma Using an Unsupervised Learning Algorithm," IJERPH, MDPI, vol. 15(1), pages 1-18, January.
    10. Sangkon Oh & Byungtae Seo, 2023. "Merging Components in Linear Gaussian Cluster-Weighted Models," Journal of Classification, Springer;The Classification Society, vol. 40(1), pages 25-51, April.
    11. Faicel Chamroukhi, 2016. "Piecewise Regression Mixture for Simultaneous Functional Data Clustering and Optimal Segmentation," Journal of Classification, Springer;The Classification Society, vol. 33(3), pages 374-411, October.
    12. Diani, Cecilia & Galimberti, Giuliano & Soffritti, Gabriele, 2022. "Multivariate cluster-weighted models based on seemingly unrelated linear regression," Computational Statistics & Data Analysis, Elsevier, vol. 171(C).
    13. Stefano Tonellato, 2019. "Bayesian nonparametric clustering as a community detection problem," Working Papers 2019: 20, Department of Economics, University of Venice "Ca' Foscari".
    14. Douglas Steinley & Michael Brusco, 2008. "Selection of Variables in Cluster Analysis: An Empirical Comparison of Eight Procedures," Psychometrika, Springer;The Psychometric Society, vol. 73(1), pages 125-144, March.
    15. Salvatore D. Tomarchio & Paul D. McNicholas & Antonio Punzo, 2021. "Matrix Normal Cluster-Weighted Models," Journal of Classification, Springer;The Classification Society, vol. 38(3), pages 556-575, October.
    16. Jacques, Julien & Biernacki, Christophe, 2018. "Model-based co-clustering for ordinal data," Computational Statistics & Data Analysis, Elsevier, vol. 123(C), pages 101-115.
    17. Yang, Yu-Chen & Lin, Tsung-I & Castro, Luis M. & Wang, Wan-Lun, 2020. "Extending finite mixtures of t linear mixed-effects models with concomitant covariates," Computational Statistics & Data Analysis, Elsevier, vol. 148(C).
    18. Michael P. B. Gallaugher & Salvatore D. Tomarchio & Paul D. McNicholas & Antonio Punzo, 2022. "Multivariate cluster weighted models using skewed distributions," Advances in Data Analysis and Classification, Springer;German Classification Society - Gesellschaft für Klassifikation (GfKl);Japanese Classification Society (JCS);Classification and Data Analysis Group of the Italian Statistical Society (CLADAG);International Federation of Classification Societies (IFCS), vol. 16(1), pages 93-124, March.
    19. Álvarez de Toledo, Pablo & Núñez, Fernando & Usabiaga, Carlos, 2018. "Matching and clustering in square contingency tables. Who matches with whom in the Spanish labour market," Computational Statistics & Data Analysis, Elsevier, vol. 127(C), pages 135-159.
    20. Isabella Morlini & Sergio Zani, 2012. "Dissimilarity and similarity measures for comparing dendrograms and their applications," Advances in Data Analysis and Classification, Springer;German Classification Society - Gesellschaft für Klassifikation (GfKl);Japanese Classification Society (JCS);Classification and Data Analysis Group of the Italian Statistical Society (CLADAG);International Federation of Classification Societies (IFCS), vol. 6(2), pages 85-105, July.

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:spr:compst:v:39:y:2024:i:5:d:10.1007_s00180-023-01387-9. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Sonal Shukla or Springer Nature Abstracting and Indexing (email available below). General contact details of provider: http://www.springer.com .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.