A Comprehensive Benchmark Study of Multiple Sequence Alignment Methods: Current Challenges and Future Perspectives
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DOI: 10.1371/journal.pone.0018093
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- Casey W. Dunn & Andreas Hejnol & David Q. Matus & Kevin Pang & William E. Browne & Stephen A. Smith & Elaine Seaver & Greg W. Rouse & Matthias Obst & Gregory D. Edgecombe & Martin V. Sørensen & Steven, 2008. "Broad phylogenomic sampling improves resolution of the animal tree of life," Nature, Nature, vol. 452(7188), pages 745-749, April.
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- Saeedeh Akbari Rokn Abadi & Negin Hashemi Dijujin & Somayyeh Koohi, 2021. "Optical pattern generator for efficient bio-data encoding in a photonic sequence comparison architecture," PLOS ONE, Public Library of Science, vol. 16(1), pages 1-27, January.
- Amin Hosseininasab & Willem-Jan van Hoeve, 2021. "Exact Multiple Sequence Alignment by Synchronized Decision Diagrams," INFORMS Journal on Computing, INFORMS, vol. 33(2), pages 721-738, May.
- Ya-Mei Ding & Xiao-Xu Pang & Yu Cao & Wei-Ping Zhang & Susanne S. Renner & Da-Yong Zhang & Wei-Ning Bai, 2023. "Genome structure-based Juglandaceae phylogenies contradict alignment-based phylogenies and substitution rates vary with DNA repair genes," Nature Communications, Nature, vol. 14(1), pages 1-13, December.
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