Learning from Heterogeneous Data Sources: An Application in Spatial Proteomics
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DOI: 10.1371/journal.pcbi.1004920
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References listed on IDEAS
- Jens S. Andersen & Christopher J. Wilkinson & Thibault Mayor & Peter Mortensen & Erich A. Nigg & Matthias Mann, 2003. "Proteomic characterization of the human centrosome by protein correlation profiling," Nature, Nature, vol. 426(6966), pages 570-574, December.
- Morik, Katharina & Brockhausen, Peter & Joachims, Thorsten, 1999. "Combining statistical learning with a knowledge-based approach: A case study in intensive care monitoring," Technical Reports 1999,24, Technische Universität Dortmund, Sonderforschungsbereich 475: Komplexitätsreduktion in multivariaten Datenstrukturen.
- Andy Christoforou & Claire M. Mulvey & Lisa M. Breckels & Aikaterini Geladaki & Tracey Hurrell & Penelope C. Hayward & Thomas Naake & Laurent Gatto & Rosa Viner & Alfonso Martinez Arias & Kathryn S. L, 2016. "A draft map of the mouse pluripotent stem cell spatial proteome," Nature Communications, Nature, vol. 7(1), pages 1-12, April.
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Cited by:
- Oliver M Crook & Aikaterini Geladaki & Daniel J H Nightingale & Owen L Vennard & Kathryn S Lilley & Laurent Gatto & Paul D W Kirk, 2020. "A semi-supervised Bayesian approach for simultaneous protein sub-cellular localisation assignment and novelty detection," PLOS Computational Biology, Public Library of Science, vol. 16(11), pages 1-21, November.
- Oliver M. Crook & Colin T. R. Davies & Lisa M. Breckels & Josie A. Christopher & Laurent Gatto & Paul D. W. Kirk & Kathryn S. Lilley, 2022. "Inferring differential subcellular localisation in comparative spatial proteomics using BANDLE," Nature Communications, Nature, vol. 13(1), pages 1-21, December.
- Octavio R. Salazar & Ke Chen & Vanessa J. Melino & Muppala P. Reddy & Eva Hřibová & Jana Čížková & Denisa Beránková & Juan Pablo Arciniegas Vega & Lina María Cáceres Leal & Manuel Aranda & Lukasz Jare, 2024. "SOS1 tonoplast neo-localization and the RGG protein SALTY are important in the extreme salinity tolerance of Salicornia bigelovii," Nature Communications, Nature, vol. 15(1), pages 1-21, December.
- Oliver M Crook & Claire M Mulvey & Paul D W Kirk & Kathryn S Lilley & Laurent Gatto, 2018. "A Bayesian mixture modelling approach for spatial proteomics," PLOS Computational Biology, Public Library of Science, vol. 14(11), pages 1-29, November.
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