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Temporal Encoding in a Nervous System

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  • Zane N Aldworth
  • Alexander G Dimitrov
  • Graham I Cummins
  • Tomáš Gedeon
  • John P Miller

Abstract

We examined the extent to which temporal encoding may be implemented by single neurons in the cercal sensory system of the house cricket Acheta domesticus. We found that these neurons exhibit a greater-than-expected coding capacity, due in part to an increased precision in brief patterns of action potentials. We developed linear and non-linear models for decoding the activity of these neurons. We found that the stimuli associated with short-interval patterns of spikes (ISIs of 8 ms or less) could be predicted better by second-order models as compared to linear models. Finally, we characterized the difference between these linear and second-order models in a low-dimensional subspace, and showed that modification of the linear models along only a few dimensions improved their predictive power to parity with the second order models. Together these results show that single neurons are capable of using temporal patterns of spikes as fundamental symbols in their neural code, and that they communicate specific stimulus distributions to subsequent neural structures. Author Summary: The information coding schemes used within nervous systems have been the focus of an entire field within neuroscience. An unresolved issue within the general coding problem is the determination of the neural “symbols” with which information is encoded in neural spike trains, analogous to the determination of the nucleotide sequences used to represent proteins in molecular biology. The goal of our study was to determine if pairs of consecutive action potentials contain more or different information about the stimuli that elicit them than would be predicted from an analysis of individual action potentials. We developed linear and non-linear coding models and used likelihood analysis to address this question for sensory interneurons in the cricket cercal sensory system. Our results show that these neurons' spike trains can be decomposed into sequences of two neural symbols: isolated single spikes and short-interval spike doublets. Given the ubiquitous nature of similar neural activity reported in other systems, we suspect that the implementation of such temporal encoding schemes may be widespread across animal phyla. Knowledge of the basic coding units used by single cells will help in building the large-scale neural network models necessary for understanding how nervous systems function.

Suggested Citation

  • Zane N Aldworth & Alexander G Dimitrov & Graham I Cummins & Tomáš Gedeon & John P Miller, 2011. "Temporal Encoding in a Nervous System," PLOS Computational Biology, Public Library of Science, vol. 7(5), pages 1-19, May.
  • Handle: RePEc:plo:pcbi00:1002041
    DOI: 10.1371/journal.pcbi.1002041
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    References listed on IDEAS

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    1. Ilya Nemenman & Geoffrey D Lewen & William Bialek & Rob R de Ruyter van Steveninck, 2008. "Neural Coding of Natural Stimuli: Information at Sub-Millisecond Resolution," PLOS Computational Biology, Public Library of Science, vol. 4(3), pages 1-12, March.
    2. Daniel A. Butts & Chong Weng & Jianzhong Jin & Chun-I Yeh & Nicholas A. Lesica & Jose-Manuel Alonso & Garrett B. Stanley, 2007. "Temporal precision in the neural code and the timescales of natural vision," Nature, Nature, vol. 449(7158), pages 92-95, September.
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    Cited by:

    1. Julie E Elie & Frédéric E Theunissen, 2019. "Invariant neural responses for sensory categories revealed by the time-varying information for communication calls," PLOS Computational Biology, Public Library of Science, vol. 15(9), pages 1-43, September.
    2. Alexander B Neiman & David F Russell & Michael H Rowe, 2011. "Identifying Temporal Codes in Spontaneously Active Sensory Neurons," PLOS ONE, Public Library of Science, vol. 6(11), pages 1-13, November.

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