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Emergence of Noise-Induced Oscillations in the Central Circadian Pacemaker

Author

Listed:
  • Caroline H Ko
  • Yujiro R Yamada
  • David K Welsh
  • Ethan D Buhr
  • Andrew C Liu
  • Eric E Zhang
  • Martin R Ralph
  • Steve A Kay
  • Daniel B Forger
  • Joseph S Takahashi

Abstract

Computational modeling and experimentation explain how intercellular coupling and intracellular noise can generate oscillations in a mammalian neuronal network even in the absence of cell-autonomous oscillators.Bmal1 is an essential transcriptional activator within the mammalian circadian clock. We report here that the suprachiasmatic nucleus (SCN) of Bmal1-null mutant mice, unexpectedly, generates stochastic oscillations with periods that overlap the circadian range. Dissociated SCN neurons expressed fluctuating levels of PER2 detected by bioluminescence imaging but could not generate circadian oscillations intrinsically. Inhibition of intercellular communication or cyclic-AMP signaling in SCN slices, which provide a positive feed-forward signal to drive the intracellular negative feedback loop, abolished the stochastic oscillations. Propagation of this feed-forward signal between SCN neurons then promotes quasi-circadian oscillations that arise as an emergent property of the SCN network. Experimental analysis and mathematical modeling argue that both intercellular coupling and molecular noise are required for the stochastic rhythms, providing a novel biological example of noise-induced oscillations. The emergence of stochastic circadian oscillations from the SCN network in the absence of cell-autonomous circadian oscillatory function highlights a previously unrecognized level of circadian organization.Author Summary: The suprachiasmatic nucleus (SCN) is the master circadian pacemaker in mammals that controls and coordinates physiological processes in a daily manner. The SCN is composed of a network of cells, with each cell acting as an autonomous oscillator. In isolated individual cells, timekeeping is not precise because of the inherent randomness in the biochemical reactions within each cell, involving its core clock components. However, in the SCN network, precise rhythms can emerge because of intercellular coupling. In this article, we study a loss-of-function mutation of BMAL1, a core clock component, which eliminates timekeeping in isolated cells. Surprisingly, in both experiments and mathematical simulations, we find that noisy rhythms emerge from the SCN network even in the presence of this BMAL1 mutation. This random yet coordinated timekeeping has not been observed in previous modeling and experimental work and indicates that a network of cells can utilize noise to help compensate for loss of a physiological function. In normal function, the SCN network mitigates any variability observed in individual cellular rhythms and produces a precise and rhythmic network timekeeping signal. When the individual cells are no longer rhythmic, the coupling pathways within the SCN network can propagate stochastic rhythms that are a reflection of both feed-forward coupling mechanisms and intracellular noise. Thus, in a manner analogous to central pattern generators in neural circuits, rhythmicity can arise as an emergent property of the network in the absence of component pacemaker or oscillator cells.

Suggested Citation

  • Caroline H Ko & Yujiro R Yamada & David K Welsh & Ethan D Buhr & Andrew C Liu & Eric E Zhang & Martin R Ralph & Steve A Kay & Daniel B Forger & Joseph S Takahashi, 2010. "Emergence of Noise-Induced Oscillations in the Central Circadian Pacemaker," PLOS Biology, Public Library of Science, vol. 8(10), pages 1-19, October.
  • Handle: RePEc:plo:pbio00:1000513
    DOI: 10.1371/journal.pbio.1000513
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    References listed on IDEAS

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    1. Naama Barkai & Stanislas Leibler, 2000. "Circadian clocks limited by noise," Nature, Nature, vol. 403(6767), pages 267-268, January.
    2. Pål O Westermark & David K Welsh & Hitoshi Okamura & Hanspeter Herzel, 2009. "Quantification of Circadian Rhythms in Single Cells," PLOS Computational Biology, Public Library of Science, vol. 5(11), pages 1-10, November.
    3. Michael B. Elowitz & Stanislas Leibler, 2000. "A synthetic oscillatory network of transcriptional regulators," Nature, Nature, vol. 403(6767), pages 335-338, January.
    4. Kazuki Horikawa & Kana Ishimatsu & Eiichi Yoshimoto & Shigeru Kondo & Hiroyuki Takeda, 2006. "Noise-resistant and synchronized oscillation of the segmentation clock," Nature, Nature, vol. 441(7094), pages 719-723, June.
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    1. Tanya L Leise & Connie W Wang & Paula J Gitis & David K Welsh, 2012. "Persistent Cell-Autonomous Circadian Oscillations in Fibroblasts Revealed by Six-Week Single-Cell Imaging of PER2::LUC Bioluminescence," PLOS ONE, Public Library of Science, vol. 7(3), pages 1-10, March.

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