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Transcription factor dimerization activates the p300 acetyltransferase

Author

Listed:
  • Esther Ortega

    (European Molecular Biology Laboratory)

  • Srinivasan Rengachari

    (European Molecular Biology Laboratory
    Max Planck Institute for Biophysical Chemistry, Department of Molecular Biology)

  • Ziad Ibrahim

    (European Molecular Biology Laboratory
    University of Leicester)

  • Naghmeh Hoghoughi

    (CNRS UMR 5309, INSERM U1209, Université Grenoble Alpes, Institute for Advanced Biosciences)

  • Jonathan Gaucher

    (European Molecular Biology Laboratory
    Université Grenoble Alpes, INSERM U1042, HP2 Laboratory)

  • Alex S. Holehouse

    (Washington University in St. Louis)

  • Saadi Khochbin

    (CNRS UMR 5309, INSERM U1209, Université Grenoble Alpes, Institute for Advanced Biosciences)

  • Daniel Panne

    (European Molecular Biology Laboratory
    University of Leicester)

Abstract

The transcriptional co-activator p300 is a histone acetyltransferase (HAT) that is typically recruited to transcriptional enhancers and regulates gene expression by acetylating chromatin. Here we show that the activation of p300 directly depends on the activation and oligomerization status of transcription factor ligands. Using two model transcription factors, IRF3 and STAT1, we demonstrate that transcription factor dimerization enables the trans-autoacetylation of p300 in a highly conserved and intrinsically disordered autoinhibitory lysine-rich loop, resulting in p300 activation. We describe a crystal structure of p300 in which the autoinhibitory loop invades the active site of a neighbouring HAT domain, revealing a snapshot of a trans-autoacetylation reaction intermediate. Substrate access to the active site involves the rearrangement of an autoinhibitory RING domain. Our data explain how cellular signalling and the activation and dimerization of transcription factors control the activation of p300, and therefore explain why gene transcription is associated with chromatin acetylation.

Suggested Citation

  • Esther Ortega & Srinivasan Rengachari & Ziad Ibrahim & Naghmeh Hoghoughi & Jonathan Gaucher & Alex S. Holehouse & Saadi Khochbin & Daniel Panne, 2018. "Transcription factor dimerization activates the p300 acetyltransferase," Nature, Nature, vol. 562(7728), pages 538-544, October.
  • Handle: RePEc:nat:nature:v:562:y:2018:i:7728:d:10.1038_s41586-018-0621-1
    DOI: 10.1038/s41586-018-0621-1
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    Citations

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    Cited by:

    1. Mandy S. M. Wan & Reyhan Muhammad & Marios G. Koliopoulos & Theodoros I. Roumeliotis & Jyoti S. Choudhary & Claudio Alfieri, 2023. "Mechanism of assembly, activation and lysine selection by the SIN3B histone deacetylase complex," Nature Communications, Nature, vol. 14(1), pages 1-13, December.
    2. Ziad Ibrahim & Tao Wang & Olivier Destaing & Nicola Salvi & Naghmeh Hoghoughi & Clovis Chabert & Alexandra Rusu & Jinjun Gao & Leonardo Feletto & Nicolas Reynoird & Thomas Schalch & Yingming Zhao & Ma, 2022. "Structural insights into p300 regulation and acetylation-dependent genome organisation," Nature Communications, Nature, vol. 13(1), pages 1-23, December.
    3. Ziping Niu & Chen Chen & Siyu Wang & Congcong Lu & Zhiyue Wu & Aiyuan Wang & Jing Mo & Jianji Zhang & Yanpu Han & Ye Yuan & Yingao Zhang & Yong Zang & Chaoran He & Xue Bai & Shanshan Tian & Guijin Zha, 2024. "HBO1 catalyzes lysine lactylation and mediates histone H3K9la to regulate gene transcription," Nature Communications, Nature, vol. 15(1), pages 1-15, December.
    4. Tim Liebner & Sinan Kilic & Jonas Walter & Hitoshi Aibara & Takeo Narita & Chunaram Choudhary, 2024. "Acetylation of histones and non-histone proteins is not a mere consequence of ongoing transcription," Nature Communications, Nature, vol. 15(1), pages 1-12, December.
    5. Zhou Huang & Hejun Liu & Jay Nix & Rui Xu & Catherine R. Knoverek & Gregory R. Bowman & Gaya K. Amarasinghe & L. David Sibley, 2022. "The intrinsically disordered protein TgIST from Toxoplasma gondii inhibits STAT1 signaling by blocking cofactor recruitment," Nature Communications, Nature, vol. 13(1), pages 1-15, December.
    6. Di Yu & Yingying Liang & Claudia Kim & Anbalagan Jaganathan & Donglei Ji & Xinye Han & Xuelan Yang & Yanjie Jia & Ruirui Gu & Chunyu Wang & Qiang Zhang & Ka Lung Cheung & Ming-Ming Zhou & Lei Zeng, 2023. "Structural mechanism of BRD4-NUT and p300 bipartite interaction in propagating aberrant gene transcription in chromatin in NUT carcinoma," Nature Communications, Nature, vol. 14(1), pages 1-16, December.
    7. Elizabeth A. R. Garfinkle & Pratima Nallagatla & Binay Sahoo & Jinjun Dang & Mohammad Balood & Anitria Cotton & Camryn Franke & Sharnise Mitchell & Taylor Wilson & Tanja A. Gruber, 2024. "CBFA2T3-GLIS2 mediates transcriptional regulation of developmental pathways through a gene regulatory network," Nature Communications, Nature, vol. 15(1), pages 1-16, December.
    8. Masaki Kikuchi & Satoshi Morita & Masatoshi Wakamori & Shin Sato & Tomomi Uchikubo-Kamo & Takehiro Suzuki & Naoshi Dohmae & Mikako Shirouzu & Takashi Umehara, 2023. "Epigenetic mechanisms to propagate histone acetylation by p300/CBP," Nature Communications, Nature, vol. 14(1), pages 1-16, December.

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