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Structural basis for the transport and regulation mechanism of the multidrug resistance-associated protein 2

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  • Eriko Koide

    (The Rockefeller University)

  • Harlan L. Pietz

    (The Rockefeller University
    Weill Cornell/Rockefeller/Sloan Kettering Tri-Institutional MD-PhD Program)

  • Jean Beltran

    (Davidson College)

  • Jue Chen

    (The Rockefeller University
    The Rockefeller University)

Abstract

Multidrug resistance-associated protein 2 (MRP2) is an ATP-powered exporter important for maintaining liver homeostasis and a potential contributor to chemotherapeutic resistance. Using cryogenic electron microscopy (cryo-EM), we determine the structures of human MRP2 in three conformational states: an autoinhibited state, a substrate-bound pre-translocation state, and an ATP-bound post-translocation state. In the autoinhibited state, the cytosolic regulatory (R) domain plugs into the transmembrane substrate-binding site and extends into the cytosol to form a composite ATP-binding site at the surface of nucleotide-binding domain 2. Substrate displaces the R domain, permitting conformational changes necessary for transport. These observations suggest that the R domain functions as a selectivity gauge, where only at sufficiently high concentrations can the substrate effectively initiate transport. Comparative structural analyzes of MRP2 bound to various substrates, as determined in this study and others, reveal how MRP2 recognizes a diverse array of compounds, supporting its role in multidrug resistance.

Suggested Citation

  • Eriko Koide & Harlan L. Pietz & Jean Beltran & Jue Chen, 2025. "Structural basis for the transport and regulation mechanism of the multidrug resistance-associated protein 2," Nature Communications, Nature, vol. 16(1), pages 1-10, December.
  • Handle: RePEc:nat:natcom:v:16:y:2025:i:1:d:10.1038_s41467-024-55810-w
    DOI: 10.1038/s41467-024-55810-w
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    1. John Jumper & Richard Evans & Alexander Pritzel & Tim Green & Michael Figurnov & Olaf Ronneberger & Kathryn Tunyasuvunakool & Russ Bates & Augustin Žídek & Anna Potapenko & Alex Bridgland & Clemens Me, 2021. "Highly accurate protein structure prediction with AlphaFold," Nature, Nature, vol. 596(7873), pages 583-589, August.
    2. Ioannis Manolaridis & Scott M. Jackson & Nicholas M. I. Taylor & Julia Kowal & Henning Stahlberg & Kaspar P. Locher, 2018. "Cryo-EM structures of a human ABCG2 mutant trapped in ATP-bound and substrate-bound states," Nature, Nature, vol. 563(7731), pages 426-430, November.
    3. Benjamin J. Orlando & Maofu Liao, 2020. "ABCG2 transports anticancer drugs via a closed-to-open switch," Nature Communications, Nature, vol. 11(1), pages 1-11, December.
    4. Yao-Xu Mao & Zhi-Peng Chen & Liang Wang & Jie Wang & Cong-Zhao Zhou & Wen-Tao Hou & Yuxing Chen, 2024. "Transport mechanism of human bilirubin transporter ABCC2 tuned by the inter-module regulatory domain," Nature Communications, Nature, vol. 15(1), pages 1-12, December.
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