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Molecular insights into the activation mechanism of GPR156 in maintaining auditory function

Author

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  • Xiangyu Ma

    (Advanced Institute for Life and Health, Jiangsu Province High-Tech Key Laboratory for Bio-Medical Research, Southeast University)

  • Li-Nan Chen

    (Zhejiang University School of Medicine
    Zhejiang University)

  • Menghui Liao

    (Advanced Institute for Life and Health, Jiangsu Province High-Tech Key Laboratory for Bio-Medical Research, Southeast University)

  • Liyan Zhang

    (Advanced Institute for Life and Health, Jiangsu Province High-Tech Key Laboratory for Bio-Medical Research, Southeast University)

  • Kun Xi

    (Zhejiang University School of Medicine)

  • Jiamin Guo

    (Advanced Institute for Life and Health, Jiangsu Province High-Tech Key Laboratory for Bio-Medical Research, Southeast University)

  • Cangsong Shen

    (Huazhong University of Science and Technology (HUST)
    Guangzhou Regenerative Medicine and Health Guangdong Laboratory)

  • Dan-Dan Shen

    (Zhejiang University School of Medicine
    Zhejiang University)

  • Pengjun Cai

    (Shanghai Institute of Materia Media, Chinese Academy of Sciences)

  • Qingya Shen

    (Zhejiang University)

  • Jieyu Qi

    (Advanced Institute for Life and Health, Jiangsu Province High-Tech Key Laboratory for Bio-Medical Research, Southeast University
    Nantong University
    School of Life Science, Beijing Institute of Technology)

  • Huibing Zhang

    (Zhejiang University School of Medicine
    Zhejiang University)

  • Shao-Kun Zang

    (Zhejiang University School of Medicine
    Zhejiang University)

  • Ying-Jun Dong

    (Zhejiang University School of Medicine
    Zhejiang University)

  • Luwei Miao

    (Zhejiang University School of Medicine
    Zhejiang University)

  • Jiao Qin

    (Zhejiang University School of Medicine
    Zhejiang University)

  • Su-Yu Ji

    (Zhejiang University School of Medicine
    Zhejiang University)

  • Yue Li

    (Shanghai Institute of Materia Media, Chinese Academy of Sciences)

  • Jianfeng Liu

    (Huazhong University of Science and Technology (HUST)
    Guangzhou Regenerative Medicine and Health Guangdong Laboratory)

  • Chunyou Mao

    (Sir Run Run Shaw Hospital, Zhejiang University School of Medicine)

  • Yan Zhang

    (Zhejiang University School of Medicine
    Zhejiang University
    Sir Run Run Shaw Hospital, Zhejiang University School of Medicine
    Zhejiang University School of Medicine)

  • Renjie Chai

    (Advanced Institute for Life and Health, Jiangsu Province High-Tech Key Laboratory for Bio-Medical Research, Southeast University
    Nantong University
    School of Life Science, Beijing Institute of Technology
    School of Medicine, University of Electronic Science and Technology of China)

Abstract

The class C orphan G-protein-coupled receptor (GPCR) GPR156, which lacks the large extracellular region, plays a pivotal role in auditory function through Gi2/3. Here, we firstly demonstrate that GPR156 with high constitutive activity is essential for maintaining auditory function, and further reveal the structural basis of the sustained role of GPR156. We present the cryo-EM structures of human apo GPR156 and the GPR156–Gi3 complex, unveiling a small extracellular region formed by extracellular loop 2 (ECL2) and the N-terminus. The GPR156 dimer in both apo state and Gi3 protein-coupled state adopt a transmembrane (TM)5/6-TM5/6 interface, indicating the high constitutive activity of GPR156 in the apo state. Furthermore, C-terminus in G-bound subunit of GPR156 plays a dual role in promoting G protein binding within G-bound subunit while preventing the G-free subunit from binding to additional G protein. Together, these results explain how GPR156 constitutive activity is maintained through dimerization and provide a mechanistic insight into the sustained role of GPR156 in maintaining auditory function.

Suggested Citation

  • Xiangyu Ma & Li-Nan Chen & Menghui Liao & Liyan Zhang & Kun Xi & Jiamin Guo & Cangsong Shen & Dan-Dan Shen & Pengjun Cai & Qingya Shen & Jieyu Qi & Huibing Zhang & Shao-Kun Zang & Ying-Jun Dong & Luwe, 2024. "Molecular insights into the activation mechanism of GPR156 in maintaining auditory function," Nature Communications, Nature, vol. 15(1), pages 1-16, December.
  • Handle: RePEc:nat:natcom:v:15:y:2024:i:1:d:10.1038_s41467-024-54681-5
    DOI: 10.1038/s41467-024-54681-5
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    as
    1. Kevin Isgrig & Devin S. McDougald & Jianliang Zhu & Hong Jun Wang & Jean Bennett & Wade W. Chien, 2019. "AAV2.7m8 is a powerful viral vector for inner ear gene therapy," Nature Communications, Nature, vol. 10(1), pages 1-8, December.
    2. Makaía M. Papasergi-Scott & Michael J. Robertson & Alpay B. Seven & Ouliana Panova & Jesper M. Mathiesen & Georgios Skiniotis, 2020. "Structures of metabotropic GABAB receptor," Nature, Nature, vol. 584(7820), pages 310-314, August.
    3. Cangsong Shen & Chunyou Mao & Chanjuan Xu & Nan Jin & Huibing Zhang & Dan-Dan Shen & Qingya Shen & Xiaomei Wang & Tingjun Hou & Zhong Chen & Philippe Rondard & Jean-Philippe Pin & Yan Zhang & Jianfeng, 2021. "Structural basis of GABAB receptor–Gi protein coupling," Nature, Nature, vol. 594(7864), pages 594-598, June.
    4. Antoine Koehl & Hongli Hu & Dan Feng & Bingfa Sun & Yan Zhang & Michael J. Robertson & Matthew Chu & Tong Sun Kobilka & Toon Laeremans & Jan Steyaert & Jeffrey Tarrasch & Somnath Dutta & Rasmus Fonsec, 2019. "Author Correction: Structural insights into the activation of metabotropic glutamate receptors," Nature, Nature, vol. 567(7747), pages 10-10, March.
    5. Kathryn Tunyasuvunakool & Jonas Adler & Zachary Wu & Tim Green & Michal Zielinski & Augustin Žídek & Alex Bridgland & Andrew Cowie & Clemens Meyer & Agata Laydon & Sameer Velankar & Gerard J. Kleywegt, 2021. "Highly accurate protein structure prediction for the human proteome," Nature, Nature, vol. 596(7873), pages 590-596, August.
    6. Xiangli Qu & Na Qiu & Mu Wang & Bingjie Zhang & Juan Du & Zhiwei Zhong & Wei Xu & Xiaojing Chu & Limin Ma & Cuiying Yi & Shuo Han & Wenqing Shui & Qiang Zhao & Beili Wu, 2022. "Structural basis of tethered agonism of the adhesion GPCRs ADGRD1 and ADGRF1," Nature, Nature, vol. 604(7907), pages 779-785, April.
    7. Antoine Koehl & Hongli Hu & Dan Feng & Bingfa Sun & Yan Zhang & Michael J. Robertson & Matthew Chu & Tong Sun Kobilka & Toon Laeremans & Jan Steyaert & Jeffrey Tarrasch & Somnath Dutta & Rasmus Fonsec, 2019. "Structural insights into the activation of metabotropic glutamate receptors," Nature, Nature, vol. 566(7742), pages 79-84, February.
    8. Eunyoung Jeong & Yoojoong Kim & Jihong Jeong & Yunje Cho, 2021. "Structure of the class C orphan GPCR GPR158 in complex with RGS7-Gβ5," Nature Communications, Nature, vol. 12(1), pages 1-11, December.
    9. Jiale Liang & Asuka Inoue & Tatsuya Ikuta & Ruixue Xia & Na Wang & Kouki Kawakami & Zhenmei Xu & Yu Qian & Xinyan Zhu & Anqi Zhang & Changyou Guo & Zhiwei Huang & Yuanzheng He, 2023. "Structural basis of lysophosphatidylserine receptor GPR174 ligand recognition and activation," Nature Communications, Nature, vol. 14(1), pages 1-10, December.
    10. Hamidreza Shaye & Andrii Ishchenko & Jordy Homing Lam & Gye Won Han & Li Xue & Philippe Rondard & Jean-Philippe Pin & Vsevolod Katritch & Cornelius Gati & Vadim Cherezov, 2020. "Structural basis of the activation of a metabotropic GABA receptor," Nature, Nature, vol. 584(7820), pages 298-303, August.
    11. Shuling Lin & Shuo Han & Xiaoqing Cai & Qiuxiang Tan & Kexiu Zhou & Dejian Wang & Xinwei Wang & Juan Du & Cuiying Yi & Xiaojing Chu & Antao Dai & Yan Zhou & Yan Chen & Yu Zhou & Hong Liu & Jianfeng Li, 2021. "Structures of Gi-bound metabotropic glutamate receptors mGlu2 and mGlu4," Nature, Nature, vol. 594(7864), pages 583-588, June.
    12. Alpay B. Seven & Ximena Barros-Álvarez & Marine Lapeyrière & Makaía M. Papasergi-Scott & Michael J. Robertson & Chensong Zhang & Robert M. Nwokonko & Yang Gao & Justin G. Meyerowitz & Jean-Philippe Ro, 2021. "G-protein activation by a metabotropic glutamate receptor," Nature, Nature, vol. 595(7867), pages 450-454, July.
    13. Juan Du & Dejian Wang & Hongcheng Fan & Chanjuan Xu & Linhua Tai & Shuling Lin & Shuo Han & Qiuxiang Tan & Xinwei Wang & Tuo Xu & Hui Zhang & Xiaojing Chu & Cuiying Yi & Peng Liu & Xiaomei Wang & Yu Z, 2021. "Structures of human mGlu2 and mGlu7 homo- and heterodimers," Nature, Nature, vol. 594(7864), pages 589-593, June.
    14. Yang Gao & Michael J. Robertson & Sabrina N. Rahman & Alpay B. Seven & Chensong Zhang & Justin G. Meyerowitz & Ouliana Panova & Fadil M. Hannan & Rajesh V. Thakker & Hans Bräuner-Osborne & Jesper M. M, 2021. "Asymmetric activation of the calcium-sensing receptor homodimer," Nature, Nature, vol. 595(7867), pages 455-459, July.
    15. Andrew S. Doré & Krzysztof Okrasa & Jayesh C. Patel & Maria Serrano-Vega & Kirstie Bennett & Robert M. Cooke & James C. Errey & Ali Jazayeri & Samir Khan & Ben Tehan & Malcolm Weir & Giselle R. Wiggin, 2014. "Structure of class C GPCR metabotropic glutamate receptor 5 transmembrane domain," Nature, Nature, vol. 511(7511), pages 557-562, July.
    16. John Jumper & Richard Evans & Alexander Pritzel & Tim Green & Michael Figurnov & Olaf Ronneberger & Kathryn Tunyasuvunakool & Russ Bates & Augustin Žídek & Anna Potapenko & Alex Bridgland & Clemens Me, 2021. "Highly accurate protein structure prediction with AlphaFold," Nature, Nature, vol. 596(7873), pages 583-589, August.
    17. Feng He & Cheng-Guo Wu & Yang Gao & Sabrina N. Rahman & Magda Zaoralová & Makaía M. Papasergi-Scott & Ting-Jia Gu & Michael J. Robertson & Alpay B. Seven & Lingjun Li & Jesper M. Mathiesen & Georgios , 2024. "Allosteric modulation and G-protein selectivity of the Ca2+-sensing receptor," Nature, Nature, vol. 626(8001), pages 1141-1148, February.
    18. Jinseo Park & Ziao Fu & Aurel Frangaj & Jonathan Liu & Lidia Mosyak & Tong Shen & Vesna N. Slavkovich & Kimberly M. Ray & Jaume Taura & Baohua Cao & Yong Geng & Hao Zuo & Yongjun Kou & Robert Grassucc, 2020. "Author Correction: Structure of human GABAB receptor in an inactive state," Nature, Nature, vol. 583(7818), pages 29-29, July.
    19. Jinseo Park & Ziao Fu & Aurel Frangaj & Jonathan Liu & Lidia Mosyak & Tong Shen & Vesna N. Slavkovich & Kimberly M. Ray & Jaume Taura & Baohua Cao & Yong Geng & Hao Zuo & Yongjun Kou & Robert Grassucc, 2020. "Structure of human GABAB receptor in an inactive state," Nature, Nature, vol. 584(7820), pages 304-309, August.
    20. Fangzhi Tan & Cenfeng Chu & Jieyu Qi & Wenyan Li & Dan You & Ke Li & Xin Chen & Weidong Zhao & Cheng Cheng & Xiaoyi Liu & Yunbo Qiao & Bing Su & Shuijin He & Chao Zhong & Huawei Li & Renjie Chai & Gui, 2019. "AAV-ie enables safe and efficient gene transfer to inner ear cells," Nature Communications, Nature, vol. 10(1), pages 1-10, December.
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