IDEAS home Printed from https://ideas.repec.org/a/nat/natcom/v15y2024i1d10.1038_s41467-024-51679-x.html
   My bibliography  Save this article

Smoking and alcohol by HPV status in head and neck cancer: a Mendelian randomization study

Author

Listed:
  • Abhinav Thakral

    (University of Toronto)

  • John JW. Lee

    (University of Toronto
    Sinai Health System)

  • Tianzhichao Hou

    (University of Toronto)

  • Katrina Hueniken

    (University of Toronto)

  • Tom Dudding

    (University of Bristol
    Avon Street)

  • Mark Gormley

    (University of Bristol
    Avon Street)

  • Shama Virani

    (World Health Organization)

  • Andrew Olshan

    (University of North Carolina)

  • Brenda Diergaarde

    (and UPMC Hillman Cancer Center)

  • Andrew R. Ness

    (University of Bristol)

  • Tim Waterboer

    (German Cancer Research Center (DKFZ))

  • Karl Smith-Byrne

    (World Health Organization)

  • Paul Brennan

    (World Health Organization)

  • D. Neil Hayes

    (University of Tennessee Health Science Center)

  • Eleanor Sanderson

    (University of Bristol)

  • M. Catherine Brown

    (University Health Network)

  • Sophie Huang

    (University Health Network
    University of Toronto)

  • Scott V. Bratman

    (University Health Network
    University of Toronto)

  • Anna Spreafico

    (University Health Network
    University of Toronto)

  • John Almeida

    (University of Toronto
    University Health Network)

  • Joel C. Davies

    (University of Toronto
    Sinai Health System)

  • Laura Bierut

    (Washington University School of Medicine)

  • Gary J. Macfarlane

    (University of Aberdeen)

  • Pagona Lagiou

    (University of Athens)

  • Areti Lagiou

    (University of West Attica)

  • Jerry Polesel

    (Centro di Riferimento Oncologico di Aviano (CRO) IRCCS)

  • Antonio Agudo

    (Spain; Centro de Investigación Biomédica en Red de Epidemiología y Salud Pública)

  • Laia Alemany

    (Spain; Centro de Investigación Biomédica en Red de Epidemiología y Salud Pública)

  • Wolfgang Ahrens

    (University of Bremen)

  • Claire M. Healy

    (Trinity College Dublin)

  • David I. Conway

    (University of Glasgow)

  • Mari Nygard

    (Norwegian Institute of Public Health)

  • Cristina Canova

    (University of Padua)

  • Ivana Holcatova

    (Charles University)

  • Lorenzo Richiardi

    (University of Turin and CPO-Piemonte)

  • Ariana Znaor

    (World Health Organization)

  • David P. Goldstein

    (University of Toronto
    University Health Network)

  • Rayjean J. Hung

    (Sinai Health
    University of Toronto)

  • Wei Xu

    (University of Toronto
    University of Toronto)

  • Geoffrey Liu

    (German Cancer Research Center (DKFZ)
    University Health Network
    University of Toronto)

  • Osvaldo Espin-Garcia

    (University of Toronto
    University of Toronto
    University of Western Ontario)

Abstract

HPV-positive and HPV-negative head and neck squamous cell carcinoma (HNSCC) are recognized as distinct entities. There remains uncertainty surrounding the causal effects of smoking and alcohol on the development of these two cancer types. Here we perform multivariable Mendelian randomization (MR) to evaluate the causal effects of smoking and alcohol on the risk of HPV-positive and HPV-negative HNSCC in 3431 cases and 3469 controls. Lifetime smoking exposure, as measured by the Comprehensive Smoking Index (CSI), is associated with increased risk of both HPV-negative HNSCC (OR = 3.03, 95%CI:1.75-5.24, P = 7.00E-05) and HPV-positive HNSCC (OR = 2.73, 95%CI:1.39-5.36, P = 0.003). Drinks Per Week is also linked with increased risk of both HPV-negative HNSCC (OR = 7.72, 95%CI:3.63-16.4, P = 1.00E-07) and HPV-positive HNSCC (OR = 2.66, 95%CI:1.06-6.68, P = 0.038). Smoking and alcohol independently increase the risk of both HPV-positive and HPV-negative HNSCC. These findings have important implications for understanding the modifying risk factors between HNSCC subtypes.

Suggested Citation

  • Abhinav Thakral & John JW. Lee & Tianzhichao Hou & Katrina Hueniken & Tom Dudding & Mark Gormley & Shama Virani & Andrew Olshan & Brenda Diergaarde & Andrew R. Ness & Tim Waterboer & Karl Smith-Byrne , 2024. "Smoking and alcohol by HPV status in head and neck cancer: a Mendelian randomization study," Nature Communications, Nature, vol. 15(1), pages 1-9, December.
  • Handle: RePEc:nat:natcom:v:15:y:2024:i:1:d:10.1038_s41467-024-51679-x
    DOI: 10.1038/s41467-024-51679-x
    as

    Download full text from publisher

    File URL: https://www.nature.com/articles/s41467-024-51679-x
    File Function: Abstract
    Download Restriction: no

    File URL: https://libkey.io/10.1038/s41467-024-51679-x?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    References listed on IDEAS

    as
    1. Nick Patterson & Alkes L Price & David Reich, 2006. "Population Structure and Eigenanalysis," PLOS Genetics, Public Library of Science, vol. 2(12), pages 1-20, December.
    2. Aida Ferreiro-Iglesias & James D. McKay & Nicole Brenner & Shama Virani & Corina Lesseur & Valerie Gaborieau & Andy R. Ness & Rayjean J. Hung & Geoffrey Liu & Brenda Diergaarde & Andrew F. Olshan & Ne, 2021. "Germline determinants of humoral immune response to HPV-16 protect against oropharyngeal cancer," Nature Communications, Nature, vol. 12(1), pages 1-11, December.
    3. Mark Gormley & Tom Dudding & Eleanor Sanderson & Richard M. Martin & Steven Thomas & Jessica Tyrrell & Andrew R. Ness & Paul Brennan & Marcus Munafò & Miranda Pring & Stefania Boccia & Andrew F. Olsha, 2020. "A multivariable Mendelian randomization analysis investigating smoking and alcohol consumption in oral and oropharyngeal cancer," Nature Communications, Nature, vol. 11(1), pages 1-10, December.
    Full references (including those not matched with items on IDEAS)

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Gyaneshwer Chaubey & Anurag Kadian & Saroj Bala & Vadlamudi Raghavendra Rao, 2015. "Genetic Affinity of the Bhil, Kol and Gond Mentioned in Epic Ramayana," PLOS ONE, Public Library of Science, vol. 10(6), pages 1-11, June.
    2. Estavoyer, Maxime & François, Olivier, 2022. "Theoretical analysis of principal components in an umbrella model of intraspecific evolution," Theoretical Population Biology, Elsevier, vol. 148(C), pages 11-21.
    3. Hyosik Jang & Ian M Ehrenreich, 2012. "Genome-Wide Characterization of Genetic Variation in the Unicellular, Green Alga Chlamydomonas reinhardtii," PLOS ONE, Public Library of Science, vol. 7(7), pages 1-9, July.
    4. Xiaofeng Cai & Xuepeng Sun & Chenxi Xu & Honghe Sun & Xiaoli Wang & Chenhui Ge & Zhonghua Zhang & Quanxi Wang & Zhangjun Fei & Chen Jiao & Quanhua Wang, 2021. "Genomic analyses provide insights into spinach domestication and the genetic basis of agronomic traits," Nature Communications, Nature, vol. 12(1), pages 1-12, December.
    5. Lee, Anthony J. & Hibbs, Courtney & Wright, Margaret J. & Martin, Nicholas G. & Keller, Matthew C. & Zietsch, Brendan P., 2017. "Assessing the accuracy of perceptions of intelligence based on heritable facial features," Intelligence, Elsevier, vol. 64(C), pages 1-8.
    6. Thompson Katherine L. & Linnen Catherine R. & Kubatko Laura, 2016. "Tree-based quantitative trait mapping in the presence of external covariates," Statistical Applications in Genetics and Molecular Biology, De Gruyter, vol. 15(6), pages 473-490, December.
    7. Jacobo Pardo-Seco & Alberto Gómez-Carballa & Jorge Amigo & Federico Martinón-Torres & Antonio Salas, 2014. "A Genome-Wide Study of Modern-Day Tuscans: Revisiting Herodotus's Theory on the Origin of the Etruscans," PLOS ONE, Public Library of Science, vol. 9(9), pages 1-11, September.
    8. Ilja M Nolte & Chris Wallace & Stephen J Newhouse & Daryl Waggott & Jingyuan Fu & Nicole Soranzo & Rhian Gwilliam & Panos Deloukas & Irina Savelieva & Dongling Zheng & Chrysoula Dalageorgou & Martin F, 2009. "Common Genetic Variation Near the Phospholamban Gene Is Associated with Cardiac Repolarisation: Meta-Analysis of Three Genome-Wide Association Studies," PLOS ONE, Public Library of Science, vol. 4(7), pages 1-10, July.
    9. Hoicheong Siu & Li Jin & Momiao Xiong, 2012. "Manifold Learning for Human Population Structure Studies," PLOS ONE, Public Library of Science, vol. 7(1), pages 1-18, January.
    10. Elodie Persyn & Richard Redon & Lise Bellanger & Christian Dina, 2018. "The impact of a fine-scale population stratification on rare variant association test results," PLOS ONE, Public Library of Science, vol. 13(12), pages 1-17, December.
    11. Andre Krumel Portella & Afroditi Papantoni & Catherine Paquet & Spencer Moore & Keri Shiels Rosch & Stewart Mostofsky & Richard S Lee & Kimberly R Smith & Robert Levitan & Patricia Pelufo Silveira & S, 2020. "Predicted DRD4 prefrontal gene expression moderates snack intake and stress perception in response to the environment in adolescents," PLOS ONE, Public Library of Science, vol. 15(6), pages 1-20, June.
    12. Lindsay Fernández-Rhodes & Jennifer R Malinowski & Yujie Wang & Ran Tao & Nathan Pankratz & Janina M Jeff & Sachiko Yoneyama & Cara L Carty & V Wendy Setiawan & Loic Le Marchand & Christopher Haiman &, 2018. "The genetic underpinnings of variation in ages at menarche and natural menopause among women from the multi-ethnic Population Architecture using Genomics and Epidemiology (PAGE) Study: A trans-ethnic ," PLOS ONE, Public Library of Science, vol. 13(7), pages 1-21, July.
    13. Peña-Malavera Andrea & Bruno Cecilia & Fernandez Elmer & Balzarini Monica, 2014. "Comparison of algorithms to infer genetic population structure from unlinked molecular markers," Statistical Applications in Genetics and Molecular Biology, De Gruyter, vol. 13(4), pages 391-402, August.
    14. Chi-Chun Liu & David Witonsky & Anna Gosling & Ju Hyeon Lee & Harald Ringbauer & Richard Hagan & Nisha Patel & Raphaela Stahl & John Novembre & Mark Aldenderfer & Christina Warinner & Anna Di Rienzo &, 2022. "Ancient genomes from the Himalayas illuminate the genetic history of Tibetans and their Tibeto-Burman speaking neighbors," Nature Communications, Nature, vol. 13(1), pages 1-14, December.
    15. Gad Abraham & Michael Inouye, 2014. "Fast Principal Component Analysis of Large-Scale Genome-Wide Data," PLOS ONE, Public Library of Science, vol. 9(4), pages 1-5, April.
    16. Zhao Huaqing & Rebbeck Timothy R. & Mitra Nandita, 2012. "Analyzing Genetic Association Studies with an Extended Propensity Score Approach," Statistical Applications in Genetics and Molecular Biology, De Gruyter, vol. 11(5), pages 1-24, October.
    17. Diana Chang & Alon Keinan, 2014. "Principal Component Analysis Characterizes Shared Pathogenetics from Genome-Wide Association Studies," PLOS Computational Biology, Public Library of Science, vol. 10(9), pages 1-14, September.
    18. Emile R Chimusa & Michelle Daya & Marlo Möller & Raj Ramesar & Brenna M Henn & Paul D van Helden & Nicola J Mulder & Eileen G Hoal, 2013. "Determining Ancestry Proportions in Complex Admixture Scenarios in South Africa Using a Novel Proxy Ancestry Selection Method," PLOS ONE, Public Library of Science, vol. 8(9), pages 1-14, September.
    19. Morten Dybdahl Krebs & Gonçalo Espregueira Themudo & Michael Eriksen Benros & Ole Mors & Anders D. Børglum & David Hougaard & Preben Bo Mortensen & Merete Nordentoft & Michael J. Gandal & Chun Chieh F, 2021. "Associations between patterns in comorbid diagnostic trajectories of individuals with schizophrenia and etiological factors," Nature Communications, Nature, vol. 12(1), pages 1-12, December.
    20. Bryc, Katarzyna & Bryc, Wlodek & Silverstein, Jack W., 2013. "Separation of the largest eigenvalues in eigenanalysis of genotype data from discrete subpopulations," Theoretical Population Biology, Elsevier, vol. 89(C), pages 34-43.

    More about this item

    Statistics

    Access and download statistics

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:nat:natcom:v:15:y:2024:i:1:d:10.1038_s41467-024-51679-x. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Sonal Shukla or Springer Nature Abstracting and Indexing (email available below). General contact details of provider: http://www.nature.com .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.