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TREX tetramer disruption alters RNA processing necessary for corticogenesis in THOC6 Intellectual Disability Syndrome

Author

Listed:
  • Elizabeth A. Werren

    (University of Michigan Medical School
    The Jackson Laboratory for Genomic Medicine)

  • Geneva R. LaForce

    (Case Western Reserve University School of Medicine)

  • Anshika Srivastava

    (University of Michigan Medical School
    Sanjay Gandhi Postgraduate Institute of Medical Sciences)

  • Delia R. Perillo

    (University of Michigan Medical School)

  • Shaokun Li

    (The Jackson Laboratory for Genomic Medicine)

  • Katherine Johnson

    (The Jackson Laboratory for Genomic Medicine)

  • Safa Baris

    (Marmara University, Istanbul Jeffrey Modell Diagnostic and Research Center for Primary Immunodeficiencies, The Isil Berat Barlan Center for Translational Medicine)

  • Brandon Berger

    (The Jackson Laboratory for Genomic Medicine)

  • Samantha L. Regan

    (University of Michigan Medical School)

  • Christian D. Pfennig

    (University of Michigan Medical School)

  • Sonja Munnik

    (Radboud University Medical Centre Nijmegen)

  • Rolph Pfundt

    (Radboud University Medical Centre Nijmegen)

  • Malavika Hebbar

    (University of Washington)

  • Raúl Jimenez-Heredia

    (Ludwig Boltzmann Institute for Rare and Undiagnosed Diseases)

  • Elif Karakoc-Aydiner

    (Marmara University, Istanbul Jeffrey Modell Diagnostic and Research Center for Primary Immunodeficiencies, The Isil Berat Barlan Center for Translational Medicine)

  • Ahmet Ozen

    (Marmara University, Istanbul Jeffrey Modell Diagnostic and Research Center for Primary Immunodeficiencies, The Isil Berat Barlan Center for Translational Medicine)

  • Jasmin Dmytrus

    (Research Centre for Molecular Medicine of the Austrian Academy of Sciences)

  • Ana Krolo

    (Ludwig Boltzmann Institute for Rare and Undiagnosed Diseases)

  • Ken Corning

    (Greenwood Genetic Center)

  • E. J. Prijoles

    (Greenwood Genetic Center)

  • Raymond J. Louie

    (Greenwood Genetic Center)

  • Robert Roger Lebel

    (SUNY Upstate Medical University)

  • Thuy-Linh Le

    (Paris Cité University)

  • Jeanne Amiel

    (Paris Cité University
    Hôpital Necker-Enfants Malades, AP-HP)

  • Christopher T. Gordon

    (Paris Cité University)

  • Kaan Boztug

    (Ludwig Boltzmann Institute for Rare and Undiagnosed Diseases
    Research Centre for Molecular Medicine of the Austrian Academy of Sciences
    Medical University of Vienna
    Medical University of Vienna)

  • Katta M. Girisha

    (Manipal, Manipal Academy of Higher Education)

  • Anju Shukla

    (Manipal, Manipal Academy of Higher Education)

  • Stephanie L. Bielas

    (University of Michigan Medical School
    University of Michigan Medical School)

  • Ashleigh E. Schaffer

    (Case Western Reserve University School of Medicine)

Abstract

THOC6 variants are the genetic basis of autosomal recessive THOC6 Intellectual Disability Syndrome (TIDS). THOC6 is critical for mammalian Transcription Export complex (TREX) tetramer formation, which is composed of four six-subunit THO monomers. The TREX tetramer facilitates mammalian RNA processing, in addition to the nuclear mRNA export functions of the TREX dimer conserved through yeast. Human and mouse TIDS model systems revealed novel THOC6-dependent, species-specific TREX tetramer functions. Germline biallelic Thoc6 loss-of-function (LOF) variants result in mouse embryonic lethality. Biallelic THOC6 LOF variants reduce the binding affinity of ALYREF to THOC5 without affecting the protein expression of TREX members, implicating impaired TREX tetramer formation. Defects in RNA nuclear export functions were not detected in biallelic THOC6 LOF human neural cells. Instead, mis-splicing was detected in human and mouse neural tissue, revealing novel THOC6-mediated TREX coordination of mRNA processing. We demonstrate that THOC6 is required for key signaling pathways known to regulate the transition from proliferative to neurogenic divisions during human corticogenesis. Together, these findings implicate altered RNA processing in the developmental biology of TIDS neuropathology.

Suggested Citation

  • Elizabeth A. Werren & Geneva R. LaForce & Anshika Srivastava & Delia R. Perillo & Shaokun Li & Katherine Johnson & Safa Baris & Brandon Berger & Samantha L. Regan & Christian D. Pfennig & Sonja Munnik, 2024. "TREX tetramer disruption alters RNA processing necessary for corticogenesis in THOC6 Intellectual Disability Syndrome," Nature Communications, Nature, vol. 15(1), pages 1-21, December.
  • Handle: RePEc:nat:natcom:v:15:y:2024:i:1:d:10.1038_s41467-024-45948-y
    DOI: 10.1038/s41467-024-45948-y
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