IDEAS home Printed from https://ideas.repec.org/a/nat/natcom/v15y2024i1d10.1038_s41467-024-45598-0.html
   My bibliography  Save this article

Sequential stacking link prediction algorithms for temporal networks

Author

Listed:
  • Xie He

    (Dartmouth College)

  • Amir Ghasemian

    (Yale University)

  • Eun Lee

    (Pukyong National University)

  • Aaron Clauset

    (University of Colorado
    University of Colorado, Boulder
    Santa Fe Institute)

  • Peter J. Mucha

    (Dartmouth College)

Abstract

Link prediction algorithms are indispensable tools in many scientific applications by speeding up network data collection and imputing missing connections. However, in many systems, links change over time and it remains unclear how to optimally exploit such temporal information for link predictions in such networks. Here, we show that many temporal topological features, in addition to having high computational cost, are less accurate in temporal link prediction than sequentially stacked static network features. This sequential stacking link prediction method uses 41 static network features that avoid detailed feature engineering choices and is capable of learning a highly accurate predictive distribution of future connections from historical data. We demonstrate that this algorithm works well for both partially observed and completely unobserved target layers, and on two temporal stochastic block models achieves near-oracle-level performance when combined with other single predictor methods as an ensemble learning method. Finally, we empirically illustrate that stacking multiple predictive methods together further improves performance on 19 real-world temporal networks from different domains.

Suggested Citation

  • Xie He & Amir Ghasemian & Eun Lee & Aaron Clauset & Peter J. Mucha, 2024. "Sequential stacking link prediction algorithms for temporal networks," Nature Communications, Nature, vol. 15(1), pages 1-15, December.
  • Handle: RePEc:nat:natcom:v:15:y:2024:i:1:d:10.1038_s41467-024-45598-0
    DOI: 10.1038/s41467-024-45598-0
    as

    Download full text from publisher

    File URL: https://www.nature.com/articles/s41467-024-45598-0
    File Function: Abstract
    Download Restriction: no

    File URL: https://libkey.io/10.1038/s41467-024-45598-0?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    References listed on IDEAS

    as
    1. Tao Zhou & Linyuan Lü & Yi-Cheng Zhang, 2009. "Predicting missing links via local information," The European Physical Journal B: Condensed Matter and Complex Systems, Springer;EDP Sciences, vol. 71(4), pages 623-630, October.
    2. David Liben‐Nowell & Jon Kleinberg, 2007. "The link‐prediction problem for social networks," Journal of the American Society for Information Science and Technology, Association for Information Science & Technology, vol. 58(7), pages 1019-1031, May.
    3. Yasami, Yasser & Safaei, Farshad, 2018. "A novel multilayer model for missing link prediction and future link forecasting in dynamic complex networks," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 492(C), pages 2166-2197.
    4. Toroczkai, Zoltán & Guclu, Hasan, 2007. "Proximity networks and epidemics," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 378(1), pages 68-75.
    5. Gérard Biau & Erwan Scornet, 2016. "A random forest guided tour," TEST: An Official Journal of the Spanish Society of Statistics and Operations Research, Springer;Sociedad de Estadística e Investigación Operativa, vol. 25(2), pages 197-227, June.
    6. Gérard Biau & Erwan Scornet, 2016. "Rejoinder on: A random forest guided tour," TEST: An Official Journal of the Spanish Society of Statistics and Operations Research, Springer;Sociedad de Estadística e Investigación Operativa, vol. 25(2), pages 264-268, June.
    Full references (including those not matched with items on IDEAS)

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Hou, Lei & Elsworth, Derek & Zhang, Fengshou & Wang, Zhiyuan & Zhang, Jianbo, 2023. "Evaluation of proppant injection based on a data-driven approach integrating numerical and ensemble learning models," Energy, Elsevier, vol. 264(C).
    2. Ma, Zhikai & Huo, Qian & Wang, Wei & Zhang, Tao, 2023. "Voltage-temperature aware thermal runaway alarming framework for electric vehicles via deep learning with attention mechanism in time-frequency domain," Energy, Elsevier, vol. 278(C).
    3. Patrick Krennmair & Timo Schmid, 2022. "Flexible domain prediction using mixed effects random forests," Journal of the Royal Statistical Society Series C, Royal Statistical Society, vol. 71(5), pages 1865-1894, November.
    4. Manuel J. García Rodríguez & Vicente Rodríguez Montequín & Francisco Ortega Fernández & Joaquín M. Villanueva Balsera, 2019. "Public Procurement Announcements in Spain: Regulations, Data Analysis, and Award Price Estimator Using Machine Learning," Complexity, Hindawi, vol. 2019, pages 1-20, November.
    5. Sachin Kumar & Zairu Nisha & Jagvinder Singh & Anuj Kumar Sharma, 2022. "Sensor network driven novel hybrid model based on feature selection and SVR to predict indoor temperature for energy consumption optimisation in smart buildings," International Journal of System Assurance Engineering and Management, Springer;The Society for Reliability, Engineering Quality and Operations Management (SREQOM),India, and Division of Operation and Maintenance, Lulea University of Technology, Sweden, vol. 13(6), pages 3048-3061, December.
    6. Rafiee, Samira & Salavati, Chiman & Abdollahpouri, Alireza, 2020. "CNDP: Link prediction based on common neighbors degree penalization," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 539(C).
    7. Escribano, Álvaro & Wang, Dandan, 2021. "Mixed random forest, cointegration, and forecasting gasoline prices," International Journal of Forecasting, Elsevier, vol. 37(4), pages 1442-1462.
    8. Yigit Aydede & Jan Ditzen, 2022. "Identifying the regional drivers of influenza-like illness in Nova Scotia with dominance analysis," Papers 2212.06684, arXiv.org.
    9. Siyoon Kwon & Hyoseob Noh & Il Won Seo & Sung Hyun Jung & Donghae Baek, 2021. "Identification Framework of Contaminant Spill in Rivers Using Machine Learning with Breakthrough Curve Analysis," IJERPH, MDPI, vol. 18(3), pages 1-26, January.
    10. Yan, Ran & Wang, Shuaian & Du, Yuquan, 2020. "Development of a two-stage ship fuel consumption prediction and reduction model for a dry bulk ship," Transportation Research Part E: Logistics and Transportation Review, Elsevier, vol. 138(C).
    11. Lee, Yan-Li & Zhou, Tao, 2021. "Collaborative filtering approach to link prediction," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 578(C).
    12. Yi Cao & Xue Li, 2022. "Multi-Model Attention Fusion Multilayer Perceptron Prediction Method for Subway OD Passenger Flow under COVID-19," Sustainability, MDPI, vol. 14(21), pages 1-16, November.
    13. Filmer,Deon P. & Nahata,Vatsal & Sabarwal,Shwetlena, 2021. "Preparation, Practice, and Beliefs : A Machine Learning Approach to Understanding Teacher Effectiveness," Policy Research Working Paper Series 9847, The World Bank.
    14. Daniel Boller & Michael Lechner & Gabriel Okasa, 2021. "The Effect of Sport in Online Dating: Evidence from Causal Machine Learning," Papers 2104.04601, arXiv.org.
    15. Jorge Antunes & Peter Wanke & Thiago Fonseca & Yong Tan, 2023. "Do ESG Risk Scores Influence Financial Distress? Evidence from a Dynamic NDEA Approach," Sustainability, MDPI, vol. 15(9), pages 1-32, May.
    16. Chunjiang Liu & Yikun Han & Haiyun Xu & Shihan Yang & Kaidi Wang & Yongye Su, 2024. "A Community Detection and Graph-Neural-Network-Based Link Prediction Approach for Scientific Literature," Mathematics, MDPI, vol. 12(3), pages 1-20, January.
    17. Lyudmyla Kirichenko & Tamara Radivilova & Vitalii Bulakh, 2018. "Machine Learning in Classification Time Series with Fractal Properties," Data, MDPI, vol. 4(1), pages 1-13, December.
    18. Giorgos Stamatelatos & George Drosatos & Sotirios Gyftopoulos & Helen Briola & Pavlos S. Efraimidis, 2021. "Point-of-interest lists and their potential in recommendation systems," Information Technology & Tourism, Springer, vol. 23(2), pages 209-239, June.
    19. Ivan Brandić & Lato Pezo & Nikola Bilandžija & Anamarija Peter & Jona Šurić & Neven Voća, 2023. "Comparison of Different Machine Learning Models for Modelling the Higher Heating Value of Biomass," Mathematics, MDPI, vol. 11(9), pages 1-14, April.
    20. Kai Yang & Yuan Liu & Zijuan Zhao & Xingxing Zhou & Peijin Ding, 2023. "Graph attention network via node similarity for link prediction," The European Physical Journal B: Condensed Matter and Complex Systems, Springer;EDP Sciences, vol. 96(3), pages 1-10, March.

    More about this item

    Statistics

    Access and download statistics

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:nat:natcom:v:15:y:2024:i:1:d:10.1038_s41467-024-45598-0. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Sonal Shukla or Springer Nature Abstracting and Indexing (email available below). General contact details of provider: http://www.nature.com .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.