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OBERON3 and SUPPRESSOR OF MAX2 1-LIKE proteins form a regulatory module driving phloem development

Author

Listed:
  • Eva-Sophie Wallner

    (Heidelberg University
    Stanford University)

  • Nina Tonn

    (Heidelberg University)

  • Dongbo Shi

    (Heidelberg University
    Japan RIKEN Center for Sustainable Resource Science (CSRS)
    University of Potsdam
    Japan Science and Technology Agency (JST), Saitama)

  • Laura Luzzietti

    (Heidelberg University)

  • Friederike Wanke

    (University of Tübingen)

  • Pascal Hunziker

    (Heidelberg University)

  • Yingqiang Xu

    (Heidelberg University)

  • Ilona Jung

    (Heidelberg University)

  • Vadir Lopéz-Salmerón

    (Heidelberg University
    BD Bioscience)

  • Michael Gebert

    (Heidelberg University)

  • Christian Wenzl

    (Heidelberg University)

  • Jan U. Lohmann

    (Heidelberg University)

  • Klaus Harter

    (University of Tübingen)

  • Thomas Greb

    (Heidelberg University)

Abstract

Spatial specificity of cell fate decisions is central for organismal development. The phloem tissue mediates long-distance transport of energy metabolites along plant bodies and is characterized by an exceptional degree of cellular specialization. How a phloem-specific developmental program is implemented is, however, unknown. Here we reveal that the ubiquitously expressed PHD-finger protein OBE3 forms a central module with the phloem-specific SMXL5 protein for establishing the phloem developmental program in Arabidopsis thaliana. By protein interaction studies and phloem-specific ATAC-seq analyses, we show that OBE3 and SMXL5 proteins form a complex in nuclei of phloem stem cells where they promote a phloem-specific chromatin profile. This profile allows expression of OPS, BRX, BAM3, and CVP2 genes acting as mediators of phloem differentiation. Our findings demonstrate that OBE3/SMXL5 protein complexes establish nuclear features essential for determining phloem cell fate and highlight how a combination of ubiquitous and local regulators generate specificity of developmental decisions in plants.

Suggested Citation

  • Eva-Sophie Wallner & Nina Tonn & Dongbo Shi & Laura Luzzietti & Friederike Wanke & Pascal Hunziker & Yingqiang Xu & Ilona Jung & Vadir Lopéz-Salmerón & Michael Gebert & Christian Wenzl & Jan U. Lohman, 2023. "OBERON3 and SUPPRESSOR OF MAX2 1-LIKE proteins form a regulatory module driving phloem development," Nature Communications, Nature, vol. 14(1), pages 1-16, December.
    • Handle: RePEc:nat:natcom:v:14:y:2023:i:1:d:10.1038_s41467-023-37790-5
    DOI: 10.1038/s41467-023-37790-5
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    References listed on IDEAS

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    1. Claudia van den Berg & Viola Willemsen & Giel Hendriks & Peter Weisbeek & Ben Scheres, 1997. "Short-range control of cell differentiation in the Arabidopsis root meristem," Nature, Nature, vol. 390(6657), pages 287-289, November.
    2. Shunsuke Miyashima & Pawel Roszak & Iris Sevilem & Koichi Toyokura & Bernhard Blob & Jung-ok Heo & Nathan Mellor & Hanna Help-Rinta-Rahko & Sofia Otero & Wouter Smet & Mark Boekschoten & Guido Hooivel, 2019. "Mobile PEAR transcription factors integrate positional cues to prime cambial growth," Nature, Nature, vol. 565(7740), pages 490-494, January.
    3. Laurens Pauwels & Gemma Fernández Barbero & Jan Geerinck & Sofie Tilleman & Wim Grunewald & Amparo Cuéllar Pérez & José Manuel Chico & Robin Vanden Bossche & Jared Sewell & Eduardo Gil & Gloria García, 2010. "NINJA connects the co-repressor TOPLESS to jasmonate signalling," Nature, Nature, vol. 464(7289), pages 788-791, April.
    4. Liang Jiang & Xue Liu & Guosheng Xiong & Huihui Liu & Fulu Chen & Lei Wang & Xiangbing Meng & Guifu Liu & Hong Yu & Yundong Yuan & Wei Yi & Lihua Zhao & Honglei Ma & Yuanzheng He & Zhongshan Wu & Kars, 2013. "DWARF 53 acts as a repressor of strigolactone signalling in rice," Nature, Nature, vol. 504(7480), pages 401-405, December.
    5. Feng Zhou & Qibing Lin & Lihong Zhu & Yulong Ren & Kunneng Zhou & Nitzan Shabek & Fuqing Wu & Haibin Mao & Wei Dong & Lu Gan & Weiwei Ma & He Gao & Jun Chen & Chao Yang & Dan Wang & Junjie Tan & Xin Z, 2013. "D14–SCFD3-dependent degradation of D53 regulates strigolactone signalling," Nature, Nature, vol. 504(7480), pages 406-410, December.
    6. Martin Bonke & Siripong Thitamadee & Ari Pekka Mähönen & Marie-Theres Hauser & Ykä Helariutta, 2003. "APL regulates vascular tissue identity in Arabidopsis," Nature, Nature, vol. 426(6963), pages 181-186, November.
    7. Lei Wang & Bing Wang & Hong Yu & Hongyan Guo & Tao Lin & Liquan Kou & Anqi Wang & Ning Shao & Haiyan Ma & Guosheng Xiong & Xiaoqiang Li & Jun Yang & Jinfang Chu & Jiayang Li, 2020. "Transcriptional regulation of strigolactone signalling in Arabidopsis," Nature, Nature, vol. 583(7815), pages 277-281, July.
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