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The relative transmission fitness of multidrug-resistant Mycobacterium tuberculosis in a drug resistance hotspot

Author

Listed:
  • Chloé Loiseau

    (Swiss Tropical and Public Health Institute
    University of Basel)

  • Etthel M. Windels

    (ETH Zürich
    Swiss Institute of Bioinformatics)

  • Sebastian M. Gygli

    (Swiss Tropical and Public Health Institute
    University of Basel)

  • Levan Jugheli

    (Swiss Tropical and Public Health Institute
    University of Basel
    National Center for Tuberculosis and Lung Diseases (NCTLD))

  • Nino Maghradze

    (Swiss Tropical and Public Health Institute
    University of Basel
    National Center for Tuberculosis and Lung Diseases (NCTLD))

  • Daniela Brites

    (Swiss Tropical and Public Health Institute
    University of Basel)

  • Amanda Ross

    (Swiss Tropical and Public Health Institute
    University of Basel)

  • Galo Goig

    (Swiss Tropical and Public Health Institute
    University of Basel)

  • Miriam Reinhard

    (Swiss Tropical and Public Health Institute
    University of Basel)

  • Sonia Borrell

    (Swiss Tropical and Public Health Institute
    University of Basel)

  • Andrej Trauner

    (Swiss Tropical and Public Health Institute
    University of Basel)

  • Anna Dötsch

    (Swiss Tropical and Public Health Institute
    University of Basel)

  • Rusudan Aspindzelashvili

    (National Center for Tuberculosis and Lung Diseases (NCTLD))

  • Rebecca Denes

    (ETH Zürich)

  • Klaus Reither

    (Swiss Tropical and Public Health Institute
    University of Basel)

  • Christian Beisel

    (ETH Zürich)

  • Nestani Tukvadze

    (Swiss Tropical and Public Health Institute
    University of Basel
    National Center for Tuberculosis and Lung Diseases (NCTLD))

  • Zaza Avaliani

    (National Center for Tuberculosis and Lung Diseases (NCTLD))

  • Tanja Stadler

    (ETH Zürich
    Swiss Institute of Bioinformatics)

  • Sebastien Gagneux

    (Swiss Tropical and Public Health Institute
    University of Basel)

Abstract

Multidrug-resistant tuberculosis (MDR-TB) is among the most frequent causes of death due to antimicrobial resistance. Although only 3% of global TB cases are MDR, geographical hotspots with up to 40% of MDR-TB have been observed in countries of the former Soviet Union. While the quality of TB control and patient-related factors are known contributors to such hotspots, the role of the pathogen remains unclear. Here we show that in the country of Georgia, a known hotspot of MDR-TB, MDR Mycobacterium tuberculosis strains of lineage 4 (L4) transmit less than their drug-susceptible counterparts, whereas most MDR strains of L2 suffer no such defect. Our findings further indicate that the high transmission fitness of these L2 strains results from epistatic interactions between the rifampicin resistance-conferring mutation RpoB S450L, compensatory mutations in the RNA polymerase, and other pre-existing genetic features of L2/Beijing clones that circulate in Georgia. We conclude that the transmission fitness of MDR M. tuberculosis strains is heterogeneous, but can be as high as drug-susceptible forms, and that such highly drug-resistant and transmissible strains contribute to the emergence and maintenance of hotspots of MDR-TB. As these strains successfully overcome the metabolic burden of drug resistance, and given the ongoing rollout of new treatment regimens against MDR-TB, proper surveillance should be implemented to prevent these strains from acquiring resistance to the additional drugs.

Suggested Citation

  • Chloé Loiseau & Etthel M. Windels & Sebastian M. Gygli & Levan Jugheli & Nino Maghradze & Daniela Brites & Amanda Ross & Galo Goig & Miriam Reinhard & Sonia Borrell & Andrej Trauner & Anna Dötsch & Ru, 2023. "The relative transmission fitness of multidrug-resistant Mycobacterium tuberculosis in a drug resistance hotspot," Nature Communications, Nature, vol. 14(1), pages 1-11, December.
  • Handle: RePEc:nat:natcom:v:14:y:2023:i:1:d:10.1038_s41467-023-37719-y
    DOI: 10.1038/s41467-023-37719-y
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    References listed on IDEAS

    as
    1. Alexandra Gavryushkina & David Welch & Tanja Stadler & Alexei J Drummond, 2014. "Bayesian Inference of Sampled Ancestor Trees for Epidemiology and Fossil Calibration," PLOS Computational Biology, Public Library of Science, vol. 10(12), pages 1-15, December.
    2. Arturo Torres Ortiz & Jorge Coronel & Julia Rios Vidal & Cesar Bonilla & David A. J. Moore & Robert H. Gilman & Francois Balloux & Onn Min Kon & Xavier Didelot & Louis Grandjean, 2021. "Genomic signatures of pre-resistance in Mycobacterium tuberculosis," Nature Communications, Nature, vol. 12(1), pages 1-13, December.
    3. Matthias Merker & Jean-Philippe Rasigade & Maxime Barbier & Helen Cox & Silke Feuerriegel & Thomas A. Kohl & Egor Shitikov & Kadri Klaos & Cyril Gaudin & Rudy Antoine & Roland Diel & Sonia Borrell & S, 2022. "Transcontinental spread and evolution of Mycobacterium tuberculosis W148 European/Russian clade toward extensively drug resistant tuberculosis," Nature Communications, Nature, vol. 13(1), pages 1-11, December.
    Full references (including those not matched with items on IDEAS)

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