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A periplasmic cinched protein is required for siderophore secretion and virulence of Mycobacterium tuberculosis

Author

Listed:
  • Lei Zhang

    (University of Alabama at Birmingham)

  • James E. Kent

    (Sanford Burnham Prebys Medical Discovery Institute)

  • Meredith Whitaker

    (Weill Cornell Medical College)

  • David C. Young

    (Harvard Medical School)

  • Dominik Herrmann

    (University of Alabama at Birmingham)

  • Alexander E. Aleshin

    (Sanford Burnham Prebys Medical Discovery Institute)

  • Ying-Hui Ko

    (Thomas Jefferson University)

  • Gino Cingolani

    (Thomas Jefferson University)

  • Jamil S. Saad

    (University of Alabama at Birmingham)

  • D. Branch Moody

    (Harvard Medical School)

  • Francesca M. Marassi

    (Sanford Burnham Prebys Medical Discovery Institute)

  • Sabine Ehrt

    (Weill Cornell Medical College)

  • Michael Niederweis

    (University of Alabama at Birmingham)

Abstract

Iron is essential for growth of Mycobacterium tuberculosis, the causative agent of tuberculosis. To acquire iron from the host, M. tuberculosis uses the siderophores called mycobactins and carboxymycobactins. Here, we show that the rv0455c gene is essential for M. tuberculosis to grow in low-iron medium and that secretion of both mycobactins and carboxymycobactins is drastically reduced in the rv0455c deletion mutant. Both water-soluble and membrane-anchored Rv0455c are functional in siderophore secretion, supporting an intracellular role. Lack of Rv0455c results in siderophore toxicity, a phenotype observed for other siderophore secretion mutants, and severely impairs replication of M. tuberculosis in mice, demonstrating the importance of Rv0455c and siderophore secretion during disease. The crystal structure of a Rv0455c homolog reveals a novel protein fold consisting of a helical bundle with a ‘cinch’ formed by an essential intramolecular disulfide bond. These findings advance our understanding of the distinct M. tuberculosis siderophore secretion system.

Suggested Citation

  • Lei Zhang & James E. Kent & Meredith Whitaker & David C. Young & Dominik Herrmann & Alexander E. Aleshin & Ying-Hui Ko & Gino Cingolani & Jamil S. Saad & D. Branch Moody & Francesca M. Marassi & Sabin, 2022. "A periplasmic cinched protein is required for siderophore secretion and virulence of Mycobacterium tuberculosis," Nature Communications, Nature, vol. 13(1), pages 1-13, December.
  • Handle: RePEc:nat:natcom:v:13:y:2022:i:1:d:10.1038_s41467-022-29873-6
    DOI: 10.1038/s41467-022-29873-6
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    1. Kathryn Tunyasuvunakool & Jonas Adler & Zachary Wu & Tim Green & Michal Zielinski & Augustin Žídek & Alex Bridgland & Andrew Cowie & Clemens Meyer & Agata Laydon & Sameer Velankar & Gerard J. Kleywegt, 2021. "Highly accurate protein structure prediction for the human proteome," Nature, Nature, vol. 596(7873), pages 590-596, August.
    2. Rouslan G. Efremov & Rozbeh Baradaran & Leonid A. Sazanov, 2010. "The architecture of respiratory complex I," Nature, Nature, vol. 465(7297), pages 441-445, May.
    3. John Jumper & Richard Evans & Alexander Pritzel & Tim Green & Michael Figurnov & Olaf Ronneberger & Kathryn Tunyasuvunakool & Russ Bates & Augustin Žídek & Anna Potapenko & Alex Bridgland & Clemens Me, 2021. "Highly accurate protein structure prediction with AlphaFold," Nature, Nature, vol. 596(7873), pages 583-589, August.
    4. Fabian M. Arnold & Miriam S. Weber & Imre Gonda & Marc J. Gallenito & Sophia Adenau & Pascal Egloff & Iwan Zimmermann & Cedric A. J. Hutter & Lea M. Hürlimann & Eike E. Peters & Jörn Piel & Gabriele M, 2020. "The ABC exporter IrtAB imports and reduces mycobacterial siderophores," Nature, Nature, vol. 580(7803), pages 413-417, April.
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