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Accelerated discovery of superoxide-dismutase nanozymes via high-throughput computational screening

Author

Listed:
  • Zhenzhen Wang

    (National Center for Nanoscience and Technology of China)

  • Jiangjiexing Wu

    (Nanjing University)

  • Jia-Jia Zheng

    (National Center for Nanoscience and Technology of China)

  • Xiaomei Shen

    (Jiangxi Normal University)

  • Liang Yan

    (Chinese Academy of Sciences)

  • Hui Wei

    (Nanjing University)

  • Xingfa Gao

    (National Center for Nanoscience and Technology of China)

  • Yuliang Zhao

    (Chinese Academy of Sciences)

Abstract

The activity of nanomaterials (NMs) in catalytically scavenging superoxide anions mimics that of superoxide dismutase (SOD). Although dozens of NMs have been demonstrated to possess such activity, the underlying principles are unclear, hindering the discovery of NMs as the novel SOD mimics. In this work, we use density functional theory calculations to study the thermodynamics and kinetics of the catalytic processes, and we develop two principles, namely, an energy level principle and an adsorption energy principle, for the activity. The first principle quantitatively describes the role of the intermediate frontier molecular orbital in transferring electrons for catalysis. The second one quantitatively describes the competition between the desired catalytic reaction and undesired side reactions. The ability of the principles to predict the SOD-like activities of metal-organic frameworks were verified by experiments. Both principles can be easily implemented in computer programs to computationally screen NMs with the intrinsic SOD-like activity.

Suggested Citation

  • Zhenzhen Wang & Jiangjiexing Wu & Jia-Jia Zheng & Xiaomei Shen & Liang Yan & Hui Wei & Xingfa Gao & Yuliang Zhao, 2021. "Accelerated discovery of superoxide-dismutase nanozymes via high-throughput computational screening," Nature Communications, Nature, vol. 12(1), pages 1-11, December.
  • Handle: RePEc:nat:natcom:v:12:y:2021:i:1:d:10.1038_s41467-021-27194-8
    DOI: 10.1038/s41467-021-27194-8
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    Cited by:

    1. Long Ma & Jia-Jia Zheng & Ning Zhou & Ruofei Zhang & Long Fang & Yili Yang & Xingfa Gao & Chunying Chen & Xiyun Yan & Kelong Fan, 2024. "A natural biogenic nanozyme for scavenging superoxide radicals," Nature Communications, Nature, vol. 15(1), pages 1-17, December.
    2. Haibin Si & Dexin Du & Chengcheng Jiao & Yan Sun & Lu Li & Bo Tang, 2024. "Biomimetic synergistic effect of redox site and Lewis acid for construction of efficient artificial enzyme," Nature Communications, Nature, vol. 15(1), pages 1-16, December.
    3. Ke Chen & Guo Li & Xiaoqun Gong & Qinjuan Ren & Junying Wang & Shuang Zhao & Ling Liu & Yuxing Yan & Qingshan Liu & Yang Cao & Yaoyao Ren & Qiong Qin & Qi Xin & Shu-Lin Liu & Peiyu Yao & Bo Zhang & Ji, 2024. "Atomic-scale strain engineering of atomically resolved Pt clusters transcending natural enzymes," Nature Communications, Nature, vol. 15(1), pages 1-18, December.

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