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Bayesian Group Index Regression for Modeling Chemical Mixtures and Cancer Risk

Author

Listed:
  • David C. Wheeler

    (Department of Biostatistics, School of Medicine, Virginia Commonwealth University, Richmond, VA 23298-0032, USA)

  • Salem Rustom

    (Department of Biostatistics, School of Medicine, Virginia Commonwealth University, Richmond, VA 23298-0032, USA)

  • Matthew Carli

    (Department of Biostatistics, School of Medicine, Virginia Commonwealth University, Richmond, VA 23298-0032, USA)

  • Todd P. Whitehead

    (UC Berkeley School of Public Health, University of California, Berkeley, CA 94704-7394, USA)

  • Mary H. Ward

    (Occupational and Environmental Epidemiology Branch, Division of Cancer Epidemiology and Genetics, National Cancer Institute, Rockville, MD 20850, USA)

  • Catherine Metayer

    (UC Berkeley School of Public Health, University of California, Berkeley, CA 94704-7394, USA)

Abstract

There has been a growing interest in the literature on multiple environmental risk factors for diseases and an increasing emphasis on assessing multiple environmental exposures simultaneously in epidemiologic studies of cancer. One method used to analyze exposure to multiple chemical exposures is weighted quantile sum (WQS) regression. While WQS regression has been demonstrated to have good sensitivity and specificity when identifying important exposures, it has limitations including a two-step model fitting process that decreases power and model stability and a requirement that all exposures in the weighted index have associations in the same direction with the outcome, which is not realistic when chemicals in different classes have different directions and magnitude of association with a health outcome. Grouped WQS (GWQS) was proposed to allow for multiple groups of chemicals in the model where different magnitude and direction of associations are possible for each group. However, GWQS shares the limitation of WQS of a two-step estimation process and splitting of data into training and validation sets. In this paper, we propose a Bayesian group index model to avoid the estimation limitation of GWQS while having multiple exposure indices in the model. To evaluate the performance of the Bayesian group index model, we conducted a simulation study with several different exposure scenarios. We also applied the Bayesian group index method to analyze childhood leukemia risk in the California Childhood Leukemia Study (CCLS). The results showed that the Bayesian group index model had slightly better power for exposure effects and specificity and sensitivity in identifying important chemical exposure components compared with the existing frequentist method, particularly for small sample sizes. In the application to the CCLS, we found a significant negative association for insecticides, with the most important chemical being carbaryl. In addition, for children who were born and raised in the home where dust samples were taken, there was a significant positive association for herbicides with dacthal being the most important exposure. In conclusion, our approach of the Bayesian group index model appears able to make a substantial contribution to the field of environmental epidemiology.

Suggested Citation

  • David C. Wheeler & Salem Rustom & Matthew Carli & Todd P. Whitehead & Mary H. Ward & Catherine Metayer, 2021. "Bayesian Group Index Regression for Modeling Chemical Mixtures and Cancer Risk," IJERPH, MDPI, vol. 18(7), pages 1-19, March.
  • Handle: RePEc:gam:jijerp:v:18:y:2021:i:7:p:3486-:d:525265
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    References listed on IDEAS

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    1. Whitehead, T.P. & Metayer, C. & Ward, M.H. & Colt, J.S. & Gunier, R.B. & Deziel, N.C. & Rappaport, S.M. & Buffler, P.A., 2014. "Persistent organic pollutants in dust from older homes: Learning from lead," American Journal of Public Health, American Public Health Association, vol. 104(7), pages 1320-1326.
    2. David C. Wheeler & Salem Rustom & Matthew Carli & Todd P. Whitehead & Mary H. Ward & Catherine Metayer, 2021. "Assessment of Grouped Weighted Quantile Sum Regression for Modeling Chemical Mixtures and Cancer Risk," IJERPH, MDPI, vol. 18(2), pages 1-20, January.
    3. David C. Wheeler & Elizabeth K. Do & Rashelle B. Hayes & Kendall Fugate-Laus & Westley L. Fallavollita & Colleen Hughes & Bernard F. Fuemmeler, 2020. "Neighborhood Disadvantage and Tobacco Retail Outlet and Vape Shop Outlet Rates," IJERPH, MDPI, vol. 17(8), pages 1-12, April.
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    Cited by:

    1. Joseph Boyle & Mary H. Ward & Stella Koutros & Margaret R. Karagas & Molly Schwenn & Alison T. Johnson & Debra T. Silverman & David C. Wheeler, 2024. "Modeling Historic Arsenic Exposures and Spatial Risk for Bladder Cancer," Statistics in Biosciences, Springer;International Chinese Statistical Association, vol. 16(2), pages 377-394, July.
    2. Krista Schroeder & Levent Dumenci & David B. Sarwer & Jennie G. Noll & Kevin A. Henry & Shakira F. Suglia & Christine M. Forke & David C. Wheeler, 2022. "The Intersection of Neighborhood Environment and Adverse Childhood Experiences: Methods for Creation of a Neighborhood ACEs Index," IJERPH, MDPI, vol. 19(13), pages 1-19, June.
    3. Matthew Carli & Mary H. Ward & Catherine Metayer & David C. Wheeler, 2022. "Imputation of Below Detection Limit Missing Data in Chemical Mixture Analysis with Bayesian Group Index Regression," IJERPH, MDPI, vol. 19(3), pages 1-17, January.
    4. David C. Wheeler & Joseph Boyle & Matt Carli & Mary H. Ward & Catherine Metayer, 2023. "Neighborhood Deprivation, Indoor Chemical Concentrations, and Spatial Risk for Childhood Leukemia," IJERPH, MDPI, vol. 20(4), pages 1-15, February.

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