IDEAS home Printed from https://ideas.repec.org/a/eee/phsmap/v387y2008i11p2653-2659.html
   My bibliography  Save this article

Nonextensive statistical approach to non-coding human DNA

Author

Listed:
  • Oikonomou, Th.
  • Provata, A.
  • Tirnakli, U.

Abstract

We use q-exponential distributions, which maximize the nonextensive entropy Sq (defined as Sq≡(1−∑ipiq)/(q−1)), to study the size distributions of non-coding DNA (including introns and intergenic regions) in all human chromosomes. We show that the value of the exponent q describing the non-coding size distributions is similar for all chromosomes and varies between 2≤q≤2.3 with the exception of chromosomes X and Y.

Suggested Citation

  • Oikonomou, Th. & Provata, A. & Tirnakli, U., 2008. "Nonextensive statistical approach to non-coding human DNA," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 387(11), pages 2653-2659.
    • Handle: RePEc:eee:phsmap:v:387:y:2008:i:11:p:2653-2659
    DOI: 10.1016/j.physa.2007.11.051
    as

    Download full text from publisher

    File URL: http://www.sciencedirect.com/science/article/pii/S0378437107012952
    Download Restriction: Full text for ScienceDirect subscribers only. Journal offers the option of making the article available online on Science direct for a fee of $3,000
    File URL: https://libkey.io/10.1016/j.physa.2007.11.051?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    As the access to this document is restricted, you may want to search for a different version of it.

    Citations

    Citations are extracted by the CitEc Project, subscribe to its RSS feed for this item.
    as


    Cited by:

    1. Silva, R. & Silva, J.R.P. & Anselmo, D.H.A.L. & Alcaniz, J.S. & da Silva, W.J.C. & Costa, M.O., 2020. "An alternative description of power law correlations in DNA sequences," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 545(C).
    2. Wu, Zuo-Bing, 2010. "Global transposable characteristics in the complete DNA sequence of the yeast," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 389(24), pages 5698-5705.
    3. da Silva, Sérgio Luiz Eduardo Ferreira, 2021. "Newton’s cooling law in generalised statistical mechanics," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 565(C).
    4. Karakatsanis, L.P. & Pavlos, G.P. & Iliopoulos, A.C. & Pavlos, E.G. & Clark, P.M. & Duke, J.L. & Monos, D.S., 2018. "Assessing information content and interactive relationships of subgenomic DNA sequences of the MHC using complexity theory approaches based on the non-extensive statistical mechanics," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 505(C), pages 77-93.
    5. Martins, Francisco Leonardo Bezerra & do Nascimento, José Cláudio, 2022. "Power law dynamics in genealogical graphs," Physica A: Statistical Mechanics and its Applications, Elsevier, vol. 596(C).
    6. Răzvan-Cornel Sfetcu & Sorina-Cezarina Sfetcu & Vasile Preda, 2021. "Ordering Awad–Varma Entropy and Applications to Some Stochastic Models," Mathematics, MDPI, vol. 9(3), pages 1-15, January.

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:eee:phsmap:v:387:y:2008:i:11:p:2653-2659. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    We have no bibliographic references for this item. You can help adding them by using this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Catherine Liu (email available below). General contact details of provider: http://www.journals.elsevier.com/physica-a-statistical-mechpplications/ .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.