IDEAS home Printed from https://ideas.repec.org/a/eee/jmvana/v192y2022ics0047259x22000707.html
   My bibliography  Save this article

Order selection for regression-based hidden Markov model

Author

Listed:
  • Lin, Yiqi
  • Song, Xinyuan

Abstract

Hidden Markov models (HMMs) describe the relationship between two stochastic processes: an observed process and an unobservable finite-state transition process. Owing to their modeling dynamic heterogeneity, HMMs are widely used to analyze heterogeneous longitudinal data. Traditional HMMs frequently assume that the number of hidden states (i.e., the order of HMM) is a constant and should be specified prior to analysis. This assumption is unrealistic and restrictive in many applications. In this study, we consider regression-based hidden Markov model (RHMM) while allowing the number of hidden states to be unknown and determined by the data. We propose a novel likelihood-based double penalized method, along with an efficient expectation-conditional maximization with iterative thresholding-based descent (ECM–ITD) algorithm, to perform order selection in the context of RHMM. An extended Group-Sort-Fuse procedure is proposed to rank the regression coefficients and impose penalties on the discrepancy of adjacent coefficients. The order selection consistency and convergence of the ECM–ITD algorithm are established under mild conditions. Simulation studies are conducted to evaluate the empirical performance of the proposed method. An application of the proposed methodology to a real-life study on Alzheimer’s disease is presented.

Suggested Citation

  • Lin, Yiqi & Song, Xinyuan, 2022. "Order selection for regression-based hidden Markov model," Journal of Multivariate Analysis, Elsevier, vol. 192(C).
  • Handle: RePEc:eee:jmvana:v:192:y:2022:i:c:s0047259x22000707
    DOI: 10.1016/j.jmva.2022.105061
    as

    Download full text from publisher

    File URL: http://www.sciencedirect.com/science/article/pii/S0047259X22000707
    Download Restriction: Full text for ScienceDirect subscribers only

    File URL: https://libkey.io/10.1016/j.jmva.2022.105061?utm_source=ideas
    LibKey link: if access is restricted and if your library uses this service, LibKey will redirect you to where you can use your library subscription to access this item
    ---><---

    As the access to this document is restricted, you may want to search for a different version of it.

    References listed on IDEAS

    as
    1. Hansheng Wang & Bo Li & Chenlei Leng, 2009. "Shrinkage tuning parameter selection with a diverging number of parameters," Journal of the Royal Statistical Society Series B, Royal Statistical Society, vol. 71(3), pages 671-683, June.
    2. Zou, Hui, 2006. "The Adaptive Lasso and Its Oracle Properties," Journal of the American Statistical Association, American Statistical Association, vol. 101, pages 1418-1429, December.
    3. Edward Ip & Qiang Zhang & Jack Rejeski & Tammy Harris & Stephen Kritchevsky, 2013. "Partially Ordered Mixed Hidden Markov Model for the Disablement Process of Older Adults," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 108(502), pages 370-384, June.
    4. Xinyuan Song & Yemao Xia & Hongtu Zhu, 2017. "Hidden Markov latent variable models with multivariate longitudinal data," Biometrics, The International Biometric Society, vol. 73(1), pages 313-323, March.
    5. She, Yiyuan, 2012. "An iterative algorithm for fitting nonconvex penalized generalized linear models with grouped predictors," Computational Statistics & Data Analysis, Elsevier, vol. 56(10), pages 2976-2990.
    6. Chen, Jiahua & Khalili, Abbas, 2009. "Order Selection in Finite Mixture Models With a Nonsmooth Penalty," Journal of the American Statistical Association, American Statistical Association, vol. 104(485), pages 187-196.
    7. Ying Hung & Yijie Wang & Veronika Zarnitsyna & Cheng Zhu & C. F. Jeff Wu, 2013. "Hidden Markov Models With Applications in Cell Adhesion Experiments," Journal of the American Statistical Association, Taylor & Francis Journals, vol. 108(504), pages 1469-1479, December.
    8. Zhou, Jie & Song, Xinyuan & Sun, Liuquan, 2020. "Continuous time hidden Markov model for longitudinal data," Journal of Multivariate Analysis, Elsevier, vol. 179(C).
    9. Altman, Rachel MacKay, 2007. "Mixed Hidden Markov Models: An Extension of the Hidden Markov Model to the Longitudinal Data Setting," Journal of the American Statistical Association, American Statistical Association, vol. 102, pages 201-210, March.
    10. Fan J. & Li R., 2001. "Variable Selection via Nonconcave Penalized Likelihood and its Oracle Properties," Journal of the American Statistical Association, American Statistical Association, vol. 96, pages 1348-1360, December.
    Full references (including those not matched with items on IDEAS)

    Citations

    Citations are extracted by the CitEc Project, subscribe to its RSS feed for this item.
    as


    Cited by:

    1. María Luz Gámiz & Nikolaos Limnios & Mari Carmen Segovia-García, 2023. "The continuous-time hidden Markov model based on discretization. Properties of estimators and applications," Statistical Inference for Stochastic Processes, Springer, vol. 26(3), pages 525-550, October.

    Most related items

    These are the items that most often cite the same works as this one and are cited by the same works as this one.
    1. Zhou, Jie & Song, Xinyuan & Sun, Liuquan, 2020. "Continuous time hidden Markov model for longitudinal data," Journal of Multivariate Analysis, Elsevier, vol. 179(C).
    2. Gaorong Li & Liugen Xue & Heng Lian, 2012. "SCAD-penalised generalised additive models with non-polynomial dimensionality," Journal of Nonparametric Statistics, Taylor & Francis Journals, vol. 24(3), pages 681-697.
    3. repec:hum:wpaper:sfb649dp2016-047 is not listed on IDEAS
    4. Caner, Mehmet & Fan, Qingliang, 2015. "Hybrid generalized empirical likelihood estimators: Instrument selection with adaptive lasso," Journal of Econometrics, Elsevier, vol. 187(1), pages 256-274.
    5. Zhang, Ting & Wang, Lei, 2020. "Smoothed empirical likelihood inference and variable selection for quantile regression with nonignorable missing response," Computational Statistics & Data Analysis, Elsevier, vol. 144(C).
    6. Fei Jin & Lung-fei Lee, 2018. "Lasso Maximum Likelihood Estimation of Parametric Models with Singular Information Matrices," Econometrics, MDPI, vol. 6(1), pages 1-24, February.
    7. Chen, Bin & Maung, Kenwin, 2023. "Time-varying forecast combination for high-dimensional data," Journal of Econometrics, Elsevier, vol. 237(2).
    8. Guang Cheng & Hao Zhang & Zuofeng Shang, 2015. "Sparse and efficient estimation for partial spline models with increasing dimension," Annals of the Institute of Statistical Mathematics, Springer;The Institute of Statistical Mathematics, vol. 67(1), pages 93-127, February.
    9. Joel L. Horowitz & Lars Nesheim, 2018. "Using penalized likelihood to select parameters in a random coefficients multinomial logit model," CeMMAP working papers CWP29/18, Centre for Microdata Methods and Practice, Institute for Fiscal Studies.
    10. Sakyajit Bhattacharya & Paul McNicholas, 2014. "A LASSO-penalized BIC for mixture model selection," Advances in Data Analysis and Classification, Springer;German Classification Society - Gesellschaft für Klassifikation (GfKl);Japanese Classification Society (JCS);Classification and Data Analysis Group of the Italian Statistical Society (CLADAG);International Federation of Classification Societies (IFCS), vol. 8(1), pages 45-61, March.
    11. Huicong Yu & Jiaqi Wu & Weiping Zhang, 2024. "Simultaneous subgroup identification and variable selection for high dimensional data," Computational Statistics, Springer, vol. 39(6), pages 3181-3205, September.
    12. Dengke Xu & Zhongzhan Zhang & Liucang Wu, 2014. "Variable selection in high-dimensional double generalized linear models," Statistical Papers, Springer, vol. 55(2), pages 327-347, May.
    13. Qi Zhang & Yihui Zhang & Yemao Xia, 2024. "Bayesian Feature Extraction for Two-Part Latent Variable Model with Polytomous Manifestations," Mathematics, MDPI, vol. 12(5), pages 1-23, March.
    14. Jin, Fei & Lee, Lung-fei, 2018. "Irregular N2SLS and LASSO estimation of the matrix exponential spatial specification model," Journal of Econometrics, Elsevier, vol. 206(2), pages 336-358.
    15. Zhang, Shucong & Zhou, Yong, 2018. "Variable screening for ultrahigh dimensional heterogeneous data via conditional quantile correlations," Journal of Multivariate Analysis, Elsevier, vol. 165(C), pages 1-13.
    16. Luoying Yang & Tong Tong Wu, 2023. "Model‐based clustering of high‐dimensional longitudinal data via regularization," Biometrics, The International Biometric Society, vol. 79(2), pages 761-774, June.
    17. Ping Zeng & Yongyue Wei & Yang Zhao & Jin Liu & Liya Liu & Ruyang Zhang & Jianwei Gou & Shuiping Huang & Feng Chen, 2014. "Variable selection approach for zero-inflated count data via adaptive lasso," Journal of Applied Statistics, Taylor & Francis Journals, vol. 41(4), pages 879-894, April.
    18. Fei Wang & Lu Wang & Peter X.‐K. Song, 2016. "Fused lasso with the adaptation of parameter ordering in combining multiple studies with repeated measurements," Biometrics, The International Biometric Society, vol. 72(4), pages 1184-1193, December.
    19. Heng Lian, 2012. "Variable selection in high-dimensional partly linear additive models," Journal of Nonparametric Statistics, Taylor & Francis Journals, vol. 24(4), pages 825-839, December.
    20. Joel L. Horowitz, 2015. "Variable selection and estimation in high-dimensional models," CeMMAP working papers 35/15, Institute for Fiscal Studies.
    21. Abdul Wahid & Dost Muhammad Khan & Ijaz Hussain, 2017. "Robust Adaptive Lasso method for parameter’s estimation and variable selection in high-dimensional sparse models," PLOS ONE, Public Library of Science, vol. 12(8), pages 1-17, August.

    Corrections

    All material on this site has been provided by the respective publishers and authors. You can help correct errors and omissions. When requesting a correction, please mention this item's handle: RePEc:eee:jmvana:v:192:y:2022:i:c:s0047259x22000707. See general information about how to correct material in RePEc.

    If you have authored this item and are not yet registered with RePEc, we encourage you to do it here. This allows to link your profile to this item. It also allows you to accept potential citations to this item that we are uncertain about.

    If CitEc recognized a bibliographic reference but did not link an item in RePEc to it, you can help with this form .

    If you know of missing items citing this one, you can help us creating those links by adding the relevant references in the same way as above, for each refering item. If you are a registered author of this item, you may also want to check the "citations" tab in your RePEc Author Service profile, as there may be some citations waiting for confirmation.

    For technical questions regarding this item, or to correct its authors, title, abstract, bibliographic or download information, contact: Catherine Liu (email available below). General contact details of provider: http://www.elsevier.com/wps/find/journaldescription.cws_home/622892/description#description .

    Please note that corrections may take a couple of weeks to filter through the various RePEc services.

    IDEAS is a RePEc service. RePEc uses bibliographic data supplied by the respective publishers.