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Clustering data that are graph connected

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  • Benati, Stefano
  • Puerto, Justo
  • Rodríguez-Chía, Antonio M.

Abstract

A new combinatorial model for clustering is proposed for all applications in which individual and relational data are available. Individual data refer to the intrinsic features of units, they are stored in a matrix D, and are the typical input of all clustering algorithms proposed so far. Relational data refer to the observed links between units, representing social ties such as friendship, joint participation to social events, and so on. Relational data are stored in the graph G=(V,E), and the data available for clustering are the triplet G=(V,E,D), called attributed graph. Known clustering algorithms can take advantage of the relational structure of G to redefine and refine the units membership. For example, uncertain membership of units to groups can be resolved using the sociological principle that ties are more likely to form between similar units. The model proposed here shows how to take into account the graph information, combining the clique partitioning objective function (a known clustering methodology) with connectivity as the structural constraint of the resulting clusters. The model can be formulated and solved using Integer Linear Programming and a new family of cutting planes. Moderate size problems are solved, and heuristic procedures are developed for instances in which the optimal solution can only be approximated. Finally, tests conducted on simulated data show that the clusters quality is greatly improved through this methodology.

Suggested Citation

  • Benati, Stefano & Puerto, Justo & Rodríguez-Chía, Antonio M., 2017. "Clustering data that are graph connected," European Journal of Operational Research, Elsevier, vol. 261(1), pages 43-53.
  • Handle: RePEc:eee:ejores:v:261:y:2017:i:1:p:43-53
    DOI: 10.1016/j.ejor.2017.02.009
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    5. Arcagni, Alberto & Grassi, Rosanna & Stefani, Silvana & Torriero, Anna, 2017. "Higher order assortativity in complex networks," European Journal of Operational Research, Elsevier, vol. 262(2), pages 708-719.
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    7. Benati, Stefano & Ponce, Diego & Puerto, Justo & Rodríguez-Chía, Antonio M., 2022. "A branch-and-price procedure for clustering data that are graph connected," European Journal of Operational Research, Elsevier, vol. 297(3), pages 817-830.
    8. Victor Blanco & Alberto Japón & Justo Puerto, 2022. "Robust optimal classification trees under noisy labels," Advances in Data Analysis and Classification, Springer;German Classification Society - Gesellschaft für Klassifikation (GfKl);Japanese Classification Society (JCS);Classification and Data Analysis Group of the Italian Statistical Society (CLADAG);International Federation of Classification Societies (IFCS), vol. 16(1), pages 155-179, March.
    9. Alessandro Avellone & Stefano Benati & Rosanna Grassi & Giorgio Rizzini, 2022. "On Finding the Community with Maximum Persistence Probability," Papers 2206.10330, arXiv.org.
    10. Ponce, Diego & Puerto, Justo & Temprano, Francisco, 2024. "Mixed-integer linear programming formulations and column generation algorithms for the Minimum Normalized Cuts problem on networks," European Journal of Operational Research, Elsevier, vol. 316(2), pages 519-538.
    11. Luisa I. Martínez-Merino & Diego Ponce & Justo Puerto, 2023. "Constraint relaxation for the discrete ordered median problem," TOP: An Official Journal of the Spanish Society of Statistics and Operations Research, Springer;Sociedad de Estadística e Investigación Operativa, vol. 31(3), pages 538-561, October.
    12. Albareda-Sambola, Maria & Marín, Alfredo & Rodríguez-Chía, Antonio M., 2019. "Reformulated acyclic partitioning for rail-rail containers transshipment," European Journal of Operational Research, Elsevier, vol. 277(1), pages 153-165.
    13. Rota Bulò, Samuel & Pelillo, Marcello, 2017. "Dominant-set clustering: A review," European Journal of Operational Research, Elsevier, vol. 262(1), pages 1-13.

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