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Simplified Dynamic Energy Budget model for analysing ecotoxicity data

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  • Jager, Tjalling
  • Zimmer, Elke I.

Abstract

Models based on Dynamic Energy Budget (DEB) theory offer important advantages in the interpretation of toxicant effects on life-history traits. In contrast to descriptive approaches, they make use of all of the data (all time points, and all endpoints) in one framework, and yield time-independent parameters. In 1996, a suite of simplified DEB models for the analysis of standard toxicity tests was presented under the name ‘DEBtox’. Unfortunately, the original equations contained a few errors and inconsistencies. In this paper, we revisit DEBtox, presenting a new and consistent set of simplified DEB equations. The full derivation is presented in the to facilitate critical examination of our work. The simplification is appropriate for situations where body size at the start of investment in reproduction remains constant, as well as the egg costs (and thus hatchling size). These conditions are probably met in many ecotoxicological tests, allowing this framework to be used, at least as a first approach. Additionally, we present a statistical framework for fitting the model to experimental data sets, and to calculate intervals on parameter estimates, model curves and model predictions. As an illustration, we provide a case study for the effects of fluoranthene on Daphnia magna, although the framework is by no means limited to this species or toxicant.

Suggested Citation

  • Jager, Tjalling & Zimmer, Elke I., 2012. "Simplified Dynamic Energy Budget model for analysing ecotoxicity data," Ecological Modelling, Elsevier, vol. 225(C), pages 74-81.
  • Handle: RePEc:eee:ecomod:v:225:y:2012:i:c:p:74-81
    DOI: 10.1016/j.ecolmodel.2011.11.012
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    Citations

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    Cited by:

    1. Matyja, Konrad, 2023. "Standard dynamic energy budget model parameter sensitivity," Ecological Modelling, Elsevier, vol. 478(C).
    2. Jager, Tjalling & Goussen, Benoit & Gergs, André, 2023. "Using the standard DEB animal model for toxicokinetic-toxicodynamic analysis," Ecological Modelling, Elsevier, vol. 475(C).
    3. Lamonica, Dominique & Herbach, Ulysse & Orias, Frédéric & Clément, Bernard & Charles, Sandrine & Lopes, Christelle, 2016. "Mechanistic modelling of daphnid-algae dynamics within a laboratory microcosm," Ecological Modelling, Elsevier, vol. 320(C), pages 213-230.
    4. Accolla, Chiara & Vaugeois, Maxime & Rueda-Cediel, Pamela & Moore, Adrian & Marques, Gonçalo M. & Marella, Purvaja & Forbes, Valery E., 2020. "DEB-tox and Data Gaps: Consequences for individual-level outputs," Ecological Modelling, Elsevier, vol. 431(C).
    5. Jager, Tjalling & Barsi, Alpar & Hamda, Natnael T. & Martin, Benjamin T. & Zimmer, Elke I. & Ducrot, Virginie, 2014. "Dynamic energy budgets in population ecotoxicology: Applications and outlook," Ecological Modelling, Elsevier, vol. 280(C), pages 140-147.
    6. Mounier, Florence & Loizeau, Véronique & Pecquerie, Laure & Drouineau, Hilaire & Labadie, Pierre & Budzinski, Hélène & Lobry, Jérémy, 2020. "Dietary bioaccumulation of persistent organic pollutants in the common sole Solea solea in the context of global change. Part 2: Sensitivity of juvenile growth and contamination to toxicokinetic param," Ecological Modelling, Elsevier, vol. 431(C).
    7. Jager, Tjalling, 2020. "Revisiting simplified DEBtox models for analysing ecotoxicity data," Ecological Modelling, Elsevier, vol. 416(C).
    8. Jager, Tjalling & Salaberria, Iurgi & Hansen, Bjørn Henrik, 2015. "Capturing the life history of the marine copepod Calanus sinicus into a generic bioenergetics framework," Ecological Modelling, Elsevier, vol. 299(C), pages 114-120.
    9. Johnston, A.S.A. & Hodson, M.E. & Thorbek, P. & Alvarez, T. & Sibly, R.M., 2014. "An energy budget agent-based model of earthworm populations and its application to study the effects of pesticides," Ecological Modelling, Elsevier, vol. 280(C), pages 5-17.
    10. Hamda, Natnael T. & Martin, Benjamin & Poletto, Jamilynn B. & Cocherell, Dennis E. & Fangue, Nann A. & Van Eenennaam, Joel & Mora, Ethan A. & Danner, Eric, 2019. "Applying a simplified energy-budget model to explore the effects of temperature and food availability on the life history of green sturgeon (Acipenser medirostris)," Ecological Modelling, Elsevier, vol. 395(C), pages 1-10.

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